Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03776 ATGGAAGGAGATGGTTTTTGTGGTGGTTTTTTTCAGAGGTGCAAGCCTTACATAGCTATGATTTCTCTGCAATTTGGGTTCGCTGGTATGAACATAATCACAAAGGTGTCACTCAACCGTGGCATGAGCCACTATGTGCTTGTGGTTTATAGACATGCCTTTGCTACAGCAGCTATTGCTCCATTTGCTCTTGTTCTTGAGAGGAAAGTAAGGCCCAAGATCACATTTCTTATGTTCATGCAAATGTTTGTGTTGGGTCTCCTTGGGCCTGTGATTGACCAGAACTTATACTATGCTGGATTGAAATTCACTTCCCCAACTTACTCATGTGCTATAAGCAACATGCTCCCTGCAATGACCTTTGTTATGGCAGTTATTTGCAGGATGGAGAAAGTGGACATAAAAAAAGTAAGATGTCAAGCAAAGGTTATTGGAACTGTAGTTACAGTTGCTGGGGCCATGTTGATGACATTATACAAAGGGCAGGTCATTAATTTCTTGGGGTCTCAATACATGCATCATCCAAGAAACTATGTGCCTGAAAACACCACTGATTCTGCTGAGAAGGATTGGGTTAAGGGTTCTATTCTCCTCATAATTGCTACCCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAGTGACATTAAGAAAATACTCAGCTCAGCTCTCACTCACAGCAATAGTGTGTTTCTTGGGTACACTTCAATCAATTGCAGTTACCTTTGTCATGGAACACAAGCCATCTGTTTGGAACATTGGCTGGGACATGAACCTGCTTGCTGCAGCCTATGCTGGAATAGTATCATCAGGTATCACAATCTATGTTCAAGGGATTGTCATGCAGAAAAGAGGACCAGTTTTTGTCACAGCTTTCAGCCCTTTGATGATGATAATTGTAGCCATAATGGGCACTTTCATCCTTGCAGAAAAAATTTATCTTGGAGCGTAA 951 0.4185 MEGDGFCGGFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAVICRMEKVDIKKVRCQAKVIGTVVTVAGAMLMTLYKGQVINFLGSQYMHHPRNYVPENTTDSAEKDWVKGSILLIIATLAWASFFILQAVTLRKYSAQLSLTAIVCFLGTLQSIAVTFVMEHKPSVWNIGWDMNLLAAAYAGIVSSGITIYVQGIVMQKRGPVFVTAFSPLMMIIVAIMGTFILAEKIYLGA. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03776 316 PANTHER WAT1-RELATED PROTEIN 15 314 IPR030184 GO:0016020|GO:0022857
Seca2g03776 316 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Seca2g03776 316 Pfam EamA-like transporter family 193 314 IPR000620 GO:0016020
Seca2g03776 316 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03776 Seca-Chr2 116570140 116572588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03776 1 315 Nodulin-like Gene Family AT5G07050 68.025 1.14e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03776 - - pvu:PHAVU_001G118300g 580.096