Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03765 ATGATTGGTTTTTCTGGAAGGAAAAATGGTGTATATTGTAATGAGTGGCATGAGATGATTATAAGAAAATTAGTATGTAGTAGGCAAGGTTCAAGGAGTGAGAAGTATTTGAATAGGAAGGATTTTTGTCATGAGACGAGGCCTATCACTTGCATCGGATGTCAAGAAAGTCTTAGAATTCATTTAGATTATATTAGTGGAAAGTGGACTGTAATCCATTTTGAGTCAAATCACAATCATGAATTTACCCCATCTGCTTATGTACATTTGATGCCAGCTTTTCGAGGGTTGAGCGAGGGAGAAAAATCACAAGTGGATAGTTTGCATCAATATAGGGTTCATGTTGAGTCCAAGACCCTTACACATGGTTTTAATGATAACAAGCTTTCAAACTCAAATTCTAAGTGTTCTGAATAA 417 0.3573 MIGFSGRKNGVYCNEWHEMIIRKLVCSRQGSRSEKYLNRKDFCHETRPITCIGCQESLRIHLDYISGKWTVIHFESNHNHEFTPSAYVHLMPAFRGLSEGEKSQVDSLHQYRVHVESKTLTHGFNDNKLSNSNSKCSE. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03765 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 114 - -
Seca2g03765 138 Pfam FAR1 DNA-binding domain 2 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03765 Seca-Chr2 116261421 116261837 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03765 FAR1 1.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03765 - K17604 ccaj:109792835 109.383