Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03716 ATGCCTTGTTGTTTTCATTTCACTTCTTCATTGAGTCAGTTGGAGTTCTTTTCTGGACTTTCAGGCTCTAAAGATGAGAAAAGGAATTCTGGAGATAGCATTTCTGGCACAGATTCTTCCCCGGGATTGCAAATCAATGATGCTTTAAGAATGCAGATGGAGGTTCAGAAACGTTTGCATGAACAGCTTGAGGTTCAGAAGCAGTTACAAATGAGAATTGAAGCACAGGGTAAATACTTGCAGAAGATTATAGAGGAACAGCAGAAATTAGGTAGTACCTTGACGACCTCAGAAACACTTCCATTGTCCCATGATAAGCAAAATCATCCCCAGTCAGAGCCTCCTGGATCTAGTGATGCCCTTGCAGGCACTTTTTCTCCACATAAAAAACAGAGAATTGATGATGGTTCAAAGGATGTCCACACAGAAGAATGA 435 0.4115 MPCCFHFTSSLSQLEFFSGLSGSKDEKRNSGDSISGTDSSPGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTTSETLPLSHDKQNHPQSEPPGSSDALAGTFSPHKKQRIDDGSKDVHTEE. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03716 144 MobiDBLite consensus disorder prediction 91 144 - -
Seca2g03716 144 Pfam MYB-CC type transfactor, LHEQLE motif 43 89 IPR025756 -
Seca2g03716 144 MobiDBLite consensus disorder prediction 128 144 - -
Seca2g03716 144 MobiDBLite consensus disorder prediction 21 44 - -
Seca2g03716 144 MobiDBLite consensus disorder prediction 91 119 - -
Seca2g03716 144 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 23 118 IPR044848 GO:0003700
Seca2g03716 144 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03716 Seca-Chr2 114976122 114978141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03716 4 94 G2-like Transcription Factor Family AT2G01060 57.292 4.51e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03716 - - tpra:123889278 194.897