Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03715 ATGTATCATGCAAAGAAGTTTTCACCAGCAACCATGGTGCCACATAAATCTCAAAGTGGAGCTGAACAACTTGCAAATGTTGGGGTTTTGGATGGATCTGCAGTGAAAAATGCCACACCTACTGGGGGAAGTGGGAAACAACGTTTACGTTGGACATCCGATCTTCATGACCGTTTTGTGGATGCAATTACACAACTTGGTGGACCAGATAGGGCAACGCCAAAAGGGGTTCTAAGAGTGATGGGTGTACCTGGACTTACCATTTATCACGTTAAAAGTCATTTACAGGTATTGTCATGTGGTCTACTAATTTAG 315 0.4317 MYHAKKFSPATMVPHKSQSGAEQLANVGVLDGSAVKNATPTGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQVLSCGLLI. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03715 104 Gene3D - 45 100 - -
Seca2g03715 104 FunFam Myb family transcription factor 45 101 - -
Seca2g03715 104 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 96 IPR044848 GO:0003700
Seca2g03715 104 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 98 IPR006447 GO:0003677
Seca2g03715 104 SUPERFAMILY Homeodomain-like 45 97 IPR009057 -
Seca2g03715 104 Pfam Myb-like DNA-binding domain 49 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03715 Seca-Chr2 114973577 114975803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03715 46 101 G2-like Transcription Factor Family AT4G13640 71.429 9.24e-26 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca2g03715 Myb_DNA-binding 8.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03715 - - gmx:100783132 183.726