Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03710 ATGGAATCTAATGATGACAATGGAGATCATGTTGTCAATGAGCCTAGCAACAATGATAGACATGTTGGTGATTCAGAGGATAATGGTGGTCAGGAACCATTCATTGGAATGAAATTTGAGTCCCGGGAAGATGCTTATTCATTCTACACTCGTTATGCTAAATATGGGAAGAAACGAGAATCTACAGCACTTAATCCACATCCTTGTTTCAAGGTAAAATGTGGTGCTAGTTTACGTATTAAAAGAAGTTGTAATGGAAAATGGGTTGTTCATAGCTTCACCAAAGATCACAATCATGAGCTTTTTCCAGCATATGCACACTATTTTCCTTGCCACAGAGGCATTAATCAAGCTCAAAAGCAATGCATTGAAACTTTGCATAAGAGTCGTCGTTTGGATTTAGAATCAGGAGATGCAAATGCAATGTTGGAGTGTTTTATGCTTATGCAAGAAGAAAACCCAAGATTTTTTTATGCAATTGATTTGGATGATGAAGATCGTGTGAAAAATATATTTTGGGTTGATGCAAAAGGTAGAGATGACTATGAAGTGTTTGGAGATGTAATTTCATTTGATACAACATACATCACAAATAAGTATAAAATGTCATTTCCTCCATTTATTGGGGTGAATAATCACTTTCAGTCAAGATTACTTGGTTGTGCATTACTAGCAGATGAGACTTCAAAAACTTTCACATGGCTGATGAAAACATGGCTTAGAGCTATGGGTGGAAAGCCTCCAAATGCAATAATTACAGATCAAGATAAAGCAATGAAATCAGTTATCAAAGAGATATTTCCAAGTGCTCGACATCGATTTTATCTTTGGCATATACTGAGAAAGGTACCTGAGAAGCTTAGTCATGTATTAAGAAAACATGAAGATTTCATGACATTTCTTAACTCATGCATTTACAAGTCTTGGTCCAAGAAGCAATTTGAAGATAAATGGCAAGAAATGGTTGAAAAATTTGAATTGTGTGGGCATCAATGGATTCAATCTTTATTTGAAGAACGAGAGCATTGGGTTCCTGTTTACGTGAAGGATACATTTTTTGGTGGCATGTCAACAACTCAAAGATCAGAGAGCATCAACTCATTTTTTTGA 1110 0.3559 MESNDDNGDHVVNEPSNNDRHVGDSEDNGGQEPFIGMKFESREDAYSFYTRYAKYGKKRESTALNPHPCFKVKCGASLRIKRSCNGKWVVHSFTKDHNHELFPAYAHYFPCHRGINQAQKQCIETLHKSRRLDLESGDANAMLECFMLMQEENPRFFYAIDLDDEDRVKNIFWVDAKGRDDYEVFGDVISFDTTYITNKYKMSFPPFIGVNNHFQSRLLGCALLADETSKTFTWLMKTWLRAMGGKPPNAIITDQDKAMKSVIKEIFPSARHRFYLWHILRKVPEKLSHVLRKHEDFMTFLNSCIYKSWSKKQFEDKWQEMVEKFELCGHQWIQSLFEEREHWVPVYVKDTFFGGMSTTQRSESINSFF. 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03710 369 Pfam FAR1 DNA-binding domain 54 103 IPR004330 -
Seca2g03710 369 Pfam MULE transposase domain 188 281 IPR018289 -
Seca2g03710 369 MobiDBLite consensus disorder prediction 1 36 - -
Seca2g03710 369 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 369 IPR031052 GO:0006355
Seca2g03710 369 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03710 Seca-Chr2 114832293 114833489 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03710 MULE 2.8e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03710 - - tpra:123886760 567