Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03672 ATGGTATCAAAGCTCCATCCATGGAGCTTACCTCGTTTCAAGAAGAAGGGTTGGTGTTCTCTCAAGAAGCCATTGTTGTTTGCTGCTCTGAAGAAGCCATTGTTGTTTGATGTGAATCTTGCAGAGGCATCTTCATCTTCTTCTTCCAAGAAACCATTGCAAGATGTAACGGTTTTCCCTCTCTCTAGAAGTGAAAGAATGGAAGAAAGTGAGAGAAATGAGCCCTTATTAGCGCGCTCAAGCGAGCTTGAGCGAGAGTATCAGGATTTCCTGCTCGCGCGCTCGCTCGAGCGGAATTTCACCCAGAAAATCCCAAATCTGACCCATTTCTCTATCTCAGCCCTCGCTCGAGGGGCTAGAAGAAAAGCTAAACATGAGTCTTCTCCTTTGGCACCTTACGACTCTATTTCTTTTTCTGCACTTGCACCAGTGTTAGGGTCCAAAGCAATCAAACTCACTACCAAGTCGTGCACTCAAGAAGTCGACGCTTGCCTCCTTGTCGCCAAGCGTCCCAAGCTCGAAAACGACGACCTCAACACCTTCAATTACACCAATGTGAAGGGTCAATACTTAACACCTTTGATTTGGTTTAATTCGTTCAGGACACTTTGTTTTTTGTCGGAAGGACTTGCTGAAGATGATCAATCTTCTGAGGAAGAAGACCTTCTAAAAATAATCAGACTCTCTGAAGGACAAAATCTGTTGAACCTTCTGAAGCCAGAGACGTCACTCTACGAAGACTTACAAAAGACTTCCTATTGTAAAGAGAAGAAGAGAGAAAATGAGCATCAACCTGCTGAAATATCAGAAACTCTCTTGAACAAGATTAAGAGCCTAACTGCTGTGTGTCAGAACTTATTCATACCTACACACCTATGCAAGACAGAAGAGAAGCTAAAGAGAAGCTATCTCACAACGGCTCTAAGAAAGTATACCAAGCAATTTCCAACGACTACATTTCTCAACGAGCCTGGAGAGGCTTGGAGGAAGAAAGAATACTCGTTGAGCCTGGAGAGGCTTGTCTGTAAAAGAATACTGCTTAAGTTTCCTGGAGAGGCAATTGAAAACAAAGAATACTTGTTGGGCCTGGAGAGGCCAGGTGTGCAAAGAATACTCGTTGGGCCTGGAGAGGCCAGGTTTTCCAGAAAATCTGTAAAGATTTTGAAACACTATTCAACCCCCCTTCTAGTGTTTCCTGTGGTCCTAACATCTTTGTTCTACTCAGTGCTAGGTGCACTACCTTGCTCAGTTACTGTGTACAATGGCATTGGATCAGCTACTGTTGCTTCTCTTTTTAAGACTTTGGGTCTTAGATCTCGCGGCCAGCTTGGGGAGCGAGTCCATTTCTGCGATCGCTGTGATTTCCCCATTGCTACCTATGGACGACTAAGCCTTTTTGAGCATGCTTTTGGTCTAAATTGTGCTAGAAGCAAACACCTTGCGCGACTGCTCCCCCACAGTTGCCTCAAGATCCATTTGCGCGCTGCTCTCAAGCATAGATCCAAGAGCAACGCGCTGCCCACTCAAGCGGATCTAGGAACGACGTCGTCGCGTCTCGTCGCGTCTCGTCTCGTCCTCTGGTGGTGTTCGTCACGTCGCACAACAGGATTTGAACCTATTCTGATTGCCAAATTGTACAATGATAGAAGTGAACTTATTCTGATTGCCAAATTCTGA 1677 0.4532 MVSKLHPWSLPRFKKKGWCSLKKPLLFAALKKPLLFDVNLAEASSSSSSKKPLQDVTVFPLSRSERMEESERNEPLLARSSELEREYQDFLLARSLERNFTQKIPNLTHFSISALARGARRKAKHESSPLAPYDSISFSALAPVLGSKAIKLTTKSCTQEVDACLLVAKRPKLENDDLNTFNYTNVKGQYLTPLIWFNSFRTLCFLSEGLAEDDQSSEEEDLLKIIRLSEGQNLLNLLKPETSLYEDLQKTSYCKEKKRENEHQPAEISETLLNKIKSLTAVCQNLFIPTHLCKTEEKLKRSYLTTALRKYTKQFPTTTFLNEPGEAWRKKEYSLSLERLVCKRILLKFPGEAIENKEYLLGLERPGVQRILVGPGEARFSRKSVKILKHYSTPLLVFPVVLTSLFYSVLGALPCSVTVYNGIGSATVASLFKTLGLRSRGQLGERVHFCDRCDFPIATYGRLSLFEHAFGLNCARSKHLARLLPHSCLKIHLRAALKHRSKSNALPTQADLGTTSSRLVASRLVLWWCSSRRTTGFEPILIAKLYNDRSELILIAKF. 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03672 558 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 418 478 IPR040383 GO:0016567|GO:0061630
Seca2g03672 558 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 447 494 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03672 377 492 C2H2 Transcription Factor Family AT5G01160 43.966 5.35e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03672 K15685 - gmx:100817582 95.9005