Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g03647 | ATGAGTTCACAGCATTTCAACAATGGTGGTGGTGGTGAAGGTTTCAGTGGAGACATGAGTCTTTTCCCTTCACCTCATGTTCCTTCTTCTCTTTTTGTGGGTTCTCAAGTTCCTCTTTTATGCAAGACTATAGGGGTTGTGGATCATGTTAATGGGGTAGAGGGTTGGAAGCATGAGATAGGACTTCAGATTTTGAGCCCCTCAATGTTCCAGTCTCAAGAGAACAGAGGAACAAAGAAAACCAATGATGGAGAAGATGGGTACTTTGGGGTTGAGAACAATAATTTGTCTTTGAAACTTGGGGATGAAGTTGAAGCTAAGAGCTCTGCTTCAGGGATAATTGGATACACTAAGCTCTGTGCTAGGGGACACTGGAGGCCAGCTGAAGATGCACAACTTAAGGAGCTTGTTACTCAATATGGTCCTCAAAATTGGAACTTGATTGCAGAGCATCTTCAAGGAAGATCAGGCAAAAGTTGCAGATTGAGGTGGTTCAATCAGCTAGACCCTAGAATCAACAAAAGGGCATTTTCTGAGGAGGAAGAGGAGAGGCTCTTAGCTGCTCATAAAATGTATGGTAACAAATGGGCTATAATTGCTAGACTCTTTCCTGGAAGGACAGATAATGCAGTGAAGAATCATTGGCATGTGATCATGGCTAGAAGGCACAGGGAGCAATCTAGTGTGTATAGAAGGAGAAAACCCACAGTTGGAAGCCTTCCAAAAGGTTTAAAATTGACTCTCTCAAACAATGCAGCCAGTGAATCAACTATCTCAAGCACCATAGATGAATCTGCCTCAACTTGCACTAACCTCTCCCTCACTCCCTCTTCAGCCAAACCAACTATTAGACCTTTTGATAAACTGGGTCCAGTTCAGAATCACCAAGGCTATGAATCACAAATGGGTCAATCTAGAGAAAATGAGGTGGTAACTGGGGATGTGAGTTTTGATAATCTTCTTGGAGGTTGGAACAACACATGTAACCTTGAAGCTGTGGCAAAAGTCATGGATGTGGAGCAGTCTAATTTTTCAGATTCAAACTCAGAAGTTTCAGTATCTGAATCAGTTTGCACCAATAGGTCCAGTTTCTCAATTTCTGGGGAAAGTGAAAAAGTGGGTTATAAGATTATTAACATGTCATTCATTGATTTTCTTGGAGTAGGAGCTACATAG | 1176 | 0.4192 | MSSQHFNNGGGGEGFSGDMSLFPSPHVPSSLFVGSQVPLLCKTIGVVDHVNGVEGWKHEIGLQILSPSMFQSQENRGTKKTNDGEDGYFGVENNNLSLKLGDEVEAKSSASGIIGYTKLCARGHWRPAEDAQLKELVTQYGPQNWNLIAEHLQGRSGKSCRLRWFNQLDPRINKRAFSEEEEERLLAAHKMYGNKWAIIARLFPGRTDNAVKNHWHVIMARRHREQSSVYRRRKPTVGSLPKGLKLTLSNNAASESTISSTIDESASTCTNLSLTPSSAKPTIRPFDKLGPVQNHQGYESQMGQSRENEVVTGDVSFDNLLGGWNNTCNLEAVAKVMDVEQSNFSDSNSEVSVSESVCTNRSSFSISGESEKVGYKIINMSFIDFLGVGAT. | 392 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g03647 | 391 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Seca2g03647 | 391 | ProSiteProfiles | Myb-like domain profile. | 169 | 219 | IPR001005 | - | |
Seca2g03647 | 391 | Gene3D | - | 122 | 173 | - | - | |
Seca2g03647 | 391 | Pfam | Myb-like DNA-binding domain | 122 | 168 | IPR001005 | - | |
Seca2g03647 | 391 | Pfam | Myb-like DNA-binding domain | 174 | 217 | IPR001005 | - | |
Seca2g03647 | 391 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 169 | 223 | IPR017930 | - | |
Seca2g03647 | 391 | SMART | sant | 173 | 221 | IPR001005 | - | |
Seca2g03647 | 391 | SMART | sant | 121 | 170 | IPR001005 | - | |
Seca2g03647 | 391 | FunFam | MYB transcription factor | 175 | 243 | - | - | |
Seca2g03647 | 391 | Gene3D | - | 175 | 237 | - | - | |
Seca2g03647 | 391 | PANTHER | MYB PROTEIN-RELATED | 122 | 270 | - | - | |
Seca2g03647 | 391 | CDD | SANT | 125 | 166 | IPR001005 | - | |
Seca2g03647 | 391 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 122 | 168 | IPR017930 | - | |
Seca2g03647 | 391 | SUPERFAMILY | Homeodomain-like | 122 | 215 | IPR009057 | - | |
Seca2g03647 | 391 | CDD | SANT | 185 | 216 | IPR001005 | - | |
Seca2g03647 | 391 | FunFam | MYB transcription factor | 122 | 173 | - | - | |
Seca2g03647 | 391 | ProSiteProfiles | Myb-like domain profile. | 122 | 168 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g03647 | Seca-Chr2 | 113007313 | 113009946 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca2g03647 | 121 | 241 | MYB Transcription Factor Family | AT1G69560 | 81.818 | 5.65e-71 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Seca2g03647 | Myb_DNA-binding | 4.1e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca2g03647 | K09422 | - | gmx:100791795 | 443.736 |