Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03642 ATGCAGATCATAAGCTTCTTCTTTTTCTTAATTCTTCCCTTGGCATTTGGTGACCTACAAGTTGGTTTCTATGCCTCTTCGTGCCCAAAAGCAGAGTCCATAGTGCAGCAAGTGGTGCAGAACCGATTCAATAATGACAAGTCCATAACCGCAGCCTTGCTTCGCTTGCATTTCCATGACTGTTTTATCAGAGTTAGTTACAATACATCAATCTCATCAACAATCAGCACACACATATTTTACAGTCAAAACTTTTAA 258 0.3953 MQIISFFFFLILPLAFGDLQVGFYASSCPKAESIVQQVVQNRFNNDKSITAALLRLHFHDCFIRVSYNTSISSTISTHIFYSQNF. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03642 85 Gene3D - 19 82 - -
Seca2g03642 85 PANTHER PEROXIDASE 25-RELATED 10 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03642 85 SUPERFAMILY Heme-dependent peroxidases 17 63 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca2g03642 85 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03642 85 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03642 85 ProSiteProfiles Plant heme peroxidase family profile. 18 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g03642 85 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03642 Seca-Chr2 112623522 112623779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03642 1 64 Peroxidase AT4G26010 58.209 1.10e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03642 K00430 - gmx:100777946 105.916