Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03618 ATGGCACCCTTCATCTCCAATTCCAAGCTTCAACCCAGAAAACTCACTCTTGTCCTTAACATATCTTTCATTTTCCTCCTCTGTCTCCTTCTAAAAGCCTATCTCCACCCTTCAAACTCAAATTTTCATGGCCAGTCCAACAATGTTCCCATCACAACCATGTTCAACCATGCTAGGTTGCTCACTGATATTAGTGTTGATGGTTGCACTGACCTCCATAAGTATTCAGATTCTGCTTCTAAGTGTTCATATGTCACAACCCATCTTGACTGCAGGTCAAAAGGGTACATAAACTATATTCAAATCTTTTATTGCAATCTAGGCCAAACACCAATTATAGGATATTCTCTTCTTGCCTTATGGCTTGTGGTGTTGTTCTATCTTTTGGGTGACACAGCTTCCAATTACTTTTGCAACTCATTAGAAGGCCTTTCCAACATCTTGAGGCTATCTCCAACCATTGCTGGAGTAACACTGCTTTCTCTTGGAAATGGAGCTCCAGATTTTTTTGCTAGTGTTGTTTCTTTCACAGGATCTAGCAATGGTGATGTTGGTCTCAACAGCATTCTAGGAGGGGCTTTTTTTGTGTCAAGCACTGTTTTGGGGATTATAAGCATTTTGGTTAGCTCAAAACAAGTTACAGTTGACAAGGCAAGTTTCATTAGGGATGTCATTTTCTTCCTTTTCTCTTTGCTCATCCTCCTTATCATCATTTCCATTGGTAAAATCACCTTATTGGGTTCAATCTGCTATGTTTCTATCTACTTCCTTTATGTCTGTGCTGTCTCTGCAACACATCTATTCTATGGAGGGGATAAGAAAGAAAGGGAACTCACACTGTCTTTTGATCAGTTACTAGAGTCTAGCATACCATTGCTTGGCTATGTTGATGATGAGAAACCAAATTTGGGAGAGATAGTAGTAGTTGTTGAAGATAAGGAGAAAAAGCCATGGAGTTATGGTAATGATTCATTTTACTGTATGCACTTGGGAAAGTTACTACTACAAGTACTAGAATTACCTCTTTGCTTACCAAGAAGGCTTACTATACCAGTGGTAAGTGAGGAGAAATGGTCAAAACCATATGCAGTAATATCTGTCACAGTAGCACCAGTTTTTTTGGCAGCTCTTTGTAATACTTTGAGGGAAAACATGGGTTCAAAGAGTAGTCTAGTTGTGTATTTGACAGCTGCATTGGTTGGCATAGTTTTGGGAAATATGGCATTTGTGACTACTAAGAGGTGTAGCCCACCAAGTAAGTCCTTGTTTCCTTGGTTGGCAGGGGGTTTTGCTATGAGTGTATCATGGACTTACATAATTGCTCAGGAGTTGGTTTCTCTCTTGGTTTCAATTGGGAATATTATTGGTATTAGTCCTTCAATCCTTGGGTTAACTGTCCTAGCTTGGGGTAACTCACTTGGGGATTTGATAGCCAATGGTGCCATGGCTTTGAATGGTGGGGCAGATGGTGCACAAATGGCTATATCTGGTTGTTATGCTGGTCCTATGTTTAATACTTTGATGGGTTTGGGCTTGCCTCTTGTTCTATCAGCATGGTCTGAATATCCAGACCCATTTGTCATTCCTAAGGATGATTCCCTCTATGAAACCCTTCTTTTCTTGATTGGAGGGTTGCTTTGGGCCCTTGTAATATTGCCAAAGAAGAATATGAAGCTGGATAAATCCTTAGGGACAGGACTCTTGAGCATATACCTATGCTTTTTGTTTATAAGGTTAGTCATGGCTTTTGGTATTCTGAAATTCTAG 1767 0.4007 MAPFISNSKLQPRKLTLVLNISFIFLLCLLLKAYLHPSNSNFHGQSNNVPITTMFNHARLLTDISVDGCTDLHKYSDSASKCSYVTTHLDCRSKGYINYIQIFYCNLGQTPIIGYSLLALWLVVLFYLLGDTASNYFCNSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGSSNGDVGLNSILGGAFFVSSTVLGIISILVSSKQVTVDKASFIRDVIFFLFSLLILLIIISIGKITLLGSICYVSIYFLYVCAVSATHLFYGGDKKERELTLSFDQLLESSIPLLGYVDDEKPNLGEIVVVVEDKEKKPWSYGNDSFYCMHLGKLLLQVLELPLCLPRRLTIPVVSEEKWSKPYAVISVTVAPVFLAALCNTLRENMGSKSSLVVYLTAALVGIVLGNMAFVTTKRCSPPSKSLFPWLAGGFAMSVSWTYIIAQELVSLLVSIGNIIGISPSILGLTVLAWGNSLGDLIANGAMALNGGADGAQMAISGCYAGPMFNTLMGLGLPLVLSAWSEYPDPFVIPKDDSLYETLLFLIGGLLWALVILPKKNMKLDKSLGTGLLSIYLCFLFIRLVMAFGILKF. 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03618 588 Gene3D - 363 580 IPR044880 -
Seca2g03618 588 Gene3D - 150 281 IPR044880 -
Seca2g03618 588 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 20 586 - -
Seca2g03618 588 Pfam Sodium/calcium exchanger protein 426 579 IPR004837 GO:0016020|GO:0055085
Seca2g03618 588 Pfam Sodium/calcium exchanger protein 119 261 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03618 Seca-Chr2 111864638 111866404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03618 67 587 Antiporters AT5G17860 53.598 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03618 K13754 - gmx:100811635 813.142