Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03609 ATGATTTACCCACAGTATGTTGTGTCTGAATTGACTGAGAAAAACTTCTGGAAGATGTTTGATGCTGGTCTATATGAGCATTGTAGGAAGAAGTATGGAGCTATTGTCAATTTTGGAGAGCATAAAGTTGTCAAGAGCTGGCAGCTATTCTTGTGTGTTGTTGTTGGTCTCTACGAAAGTCTTATCATTGGATTTGTAACCGAGTACTCTACTAGCAATGCATATAACCCTGTGCAAGATGTTGCTGACTCCTACAGGACTAGCGCTGCTACTAATGTTATCTTTGGCTTTGCCTTAGGATACAAGTCTATTATTATTCCAATTATTGCCATTGCAATCAACATTTTCGTGAGTTTTACCTTTGCTGCCATTGATTTATGA 381 0.3832 MIYPQYVVSELTEKNFWKMFDAGLYEHCRKKYGAIVNFGEHKVVKSWQLFLCVVVGLYESLIIGFVTEYSTSNAYNPVQDVADSYRTSAATNVIFGFALGYKSIIIPIIAIAINIFVSFTFAAIDL. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03609 126 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 33 124 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca2g03609 126 Pfam Inorganic H+ pyrophosphatase 38 123 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03609 Seca-Chr2 111659796 111660490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03609 35 124 Primary Pumps ATPases AT1G15690 80.000 2.12e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03609 K23025 - sspl:121749585 135.961