Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03585 ATGGCAAATTGTTATGATTTAATCAAAGATATTAATGCTTCTTCTGAACAGAAGGTTTGCAGAATTAAAGTTAGAGTCATTCGGCAATGGAGATCTGCTAATTTTAAAGATTCTTCCCATAAACCTATGATTAAAATGGTTGTTTTGGATGAAGAGGGAGGTTGTATCCAGTGCACTGTAAAGAGCATTCATGTCTATTTGTTTGAGGGTATTGTCCTGGAAGGCAATATTTATATGTTAGAAAATGTTTCTGTTGCACTTAATAGTGCAAAGTTCAAACCAACAATTCATGAATTCAGACTATTTTTCAAAAGAGAAACACAAGTTCGTATGATTGAGGATTCGAACATTCCAATGAATGGATTTTCTTTTGTCCCATTTACTGATATTCTGAACGAAAAGAATGATGAAAGTCGCTTGGTTGATATTATTGGAGTTGTTACCGGAAAAGGTGAACTTATTGAATACAAGAAACAGGGAAAGTCGATCAATTACATTGTGCTTGAGTTGGAAAATTTAGAGTAA 525 0.3333 MANCYDLIKDINASSEQKVCRIKVRVIRQWRSANFKDSSHKPMIKMVVLDEEGGCIQCTVKSIHVYLFEGIVLEGNIYMLENVSVALNSAKFKPTIHEFRLFFKRETQVRMIEDSNIPMNGFSFVPFTDILNEKNDESRLVDIIGVVTGKGELIEYKKQGKSINYIVLELENLE. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03585 174 Pfam Domain of unknown function DUF223 46 138 IPR003871 -
Seca2g03585 174 Gene3D - 116 174 IPR012340 -
Seca2g03585 174 Gene3D - 7 115 IPR012340 -
Seca2g03585 174 CDD RPA1_DBD_A_like 21 109 - -
Seca2g03585 174 SUPERFAMILY Nucleic acid-binding proteins 7 114 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03585 Seca-Chr2 111100409 111106323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03585 48 172 Core DNA Replication Machinery Family AT2G06510 28.906 5.41e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03585 - - aip:107647757 194.126