Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03584 ATGGGTGATCTATTGGACATGCTAATTGAAGTAAATGACCCCATTGAGGGTTTTGAACATATAAATTTAAATGGGGCGGGTGCAGTTCATGGCAGTCCCGGTTTGGGTGAAGAAGAAAGCGATGGATCTAACCCAAGTCTTGAAGACAACAATGGAGGTTACATGGTGGATAAAGGAGGTTGTGTTGCACTGTTGGTTGATGCTGACTGTGAAGAAACATTGAATGATAATGGGGCAGGGGATGAACAAGGTGAAGAGAGCCGAATTAATATAAATAGTTTTCAGGATATGCGAGACATGAACCTCATTGAATTTAGTCCACATGAGATCATAAGATATGACTTTGCAACTTTGGATGTAGCATTTGAGTTCTATCGTTGGTATGCTCGTATGAATGGTTTTTGTGCTCGTAGAGGAAAGGTTATCAGTAGCAAAAAAATAGGGAGGGTATTACAACAAAATTTCTTTTGTTATAGAGAAGGCAAACGCGACCCAAATGGTTTAGAGGACGAAGACCGGCAGCGGCAACAAAAAGCAGTAACTAGATGCAATTGTAAAGCAGAATTCAGGGCACATGTTGATATTAACACAGGGAGGTGGAAGATGACTGTTGGTGATGTGAATCAGATAAATAATATGTTAAAGGTTGGTATTGGCGCGCCACGGATATTTGGGTCATTTGCCAACCAGTCTGGTGGTTATGAAAAGGCTGGTTTTCAGAAGAAAGACATTTATAACCAAATCGGCCAACAACGATGGTTGCAACATTCAGATGCAACAACAACAGTGAAATACTTGCGTGAGCTAGGTGTGAATGACCCAGCTATGTTTACTCGTCACACAACCAATGAGGAAGGGAGGTTGGAGCACCTATTTTGGTGTGATGGCATTATGCAATTGAATTACATGGTCTTTGGGGATGTTTTAGCATTTGACGCCACATATGGTAAGAACAAGTACCGCTTACCCCTAGTCATCTTTTCTGGTGTCAATCATCATAACCGGACCACGATATTTGCTAGTGCTGTAGTGGCAAATGAAAGTGAGGATACTTATGTCTGGTTGTTGGGTGTATTCTTAGAATCAATGAAGGGTAAGATGCCGACATCAGTGATTACAGATGGAGACCTTGCAATGAAGAATGCAATTAAAAAGGTGTTTCCAAATGCTCACCATTGGTTGTGTGCCTGGCACCTAGCTCGTAATGCTACCTCAAATGTTGTAATACCAGATTTCACAACTGGATTTGAGAAATATAAGGCATGGGTGAAAGGAATGTATAAAAAGAGGGAAATGTGGGCTACGACATACATGAGGGGTAAATTTTTTGCTGGATTTAGGACGACATCTAGGTGCGAAGGTTTGCACTCGGAGCTTGTTAAGTTTGTGCACTCGCAGTATAATCTTATTGATTTTCTACAACATTTCTATCAGTGTGTGGCCCATATGCGGTTCAAAGAACTTGAAGATGATTTTGCTTCTGTACATGGTGATCCAGTGTTGGAAACAAGTCTACAGAGTTTAGAGGGGTCAACTGCGAAACTTCTGACAAGACAAGTATTCCACCTATTTCGGCCGATTATTGAAAAAGCAAAAGAATTTAGATGTCCATGCATGTGGCTTGAATCGCGTGGGTTGCCTTGTGCACACATTGTAGGTGTGTTGGAAAATCTTAAAATGAAGGAGCTTCCTCAGTCAGTGGTTTTAAAGAGGTGGACAAAAGGAGCGAAGGACAATATGACCTCAAACAGAAGCAACTCGTTAAATTTGTGGGATGCTCAGAAGATATTTAGATGTGGAGCCTTGAATGATTTGTATAGAGAGTTGGCCGACCTTCAGTCTGACACTATTGAAGAGTATAATGAAGCTAGGGAGAAGGCAAGTTTACTAATCAGAGCCATAGAGGCGAGAAAGGCCAGAGAAAGGGCTCAAAATTGTGAATCTAGGCAGCATGAGCCTCAAACTTTGAGAGATCCTATTCGTGTTAGACACAAAGGAAGGGGTAGTGGAAGCACTTCGGCTGTAGGCTTGAGAGTAAAGCGAACAACCAAGTGTACGTATTGTAGAGTTGTTGGACATAATAGGCTAACGTGTCCTCTTCGTGCCCAAGCAGCAGACATGTCATAG 2127 0.4184 MGDLLDMLIEVNDPIEGFEHINLNGAGAVHGSPGLGEEESDGSNPSLEDNNGGYMVDKGGCVALLVDADCEETLNDNGAGDEQGEESRININSFQDMRDMNLIEFSPHEIIRYDFATLDVAFEFYRWYARMNGFCARRGKVISSKKIGRVLQQNFFCYREGKRDPNGLEDEDRQRQQKAVTRCNCKAEFRAHVDINTGRWKMTVGDVNQINNMLKVGIGAPRIFGSFANQSGGYEKAGFQKKDIYNQIGQQRWLQHSDATTTVKYLRELGVNDPAMFTRHTTNEEGRLEHLFWCDGIMQLNYMVFGDVLAFDATYGKNKYRLPLVIFSGVNHHNRTTIFASAVVANESEDTYVWLLGVFLESMKGKMPTSVITDGDLAMKNAIKKVFPNAHHWLCAWHLARNATSNVVIPDFTTGFEKYKAWVKGMYKKREMWATTYMRGKFFAGFRTTSRCEGLHSELVKFVHSQYNLIDFLQHFYQCVAHMRFKELEDDFASVHGDPVLETSLQSLEGSTAKLLTRQVFHLFRPIIEKAKEFRCPCMWLESRGLPCAHIVGVLENLKMKELPQSVVLKRWTKGAKDNMTSNRSNSLNLWDAQKIFRCGALNDLYRELADLQSDTIEEYNEAREKASLLIRAIEARKARERAQNCESRQHEPQTLRDPIRVRHKGRGSGSTSAVGLRVKRTTKCTYCRVVGHNRLTCPLRAQAADMS. 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03584 708 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 110 625 IPR031052 GO:0006355
Seca2g03584 708 MobiDBLite consensus disorder prediction 29 50 - -
Seca2g03584 708 ProSiteProfiles Zinc finger SWIM-type profile. 521 559 IPR007527 GO:0008270
Seca2g03584 708 Coils Coil 617 637 - -
Seca2g03584 708 Pfam MULE transposase domain 308 402 IPR018289 -
Seca2g03584 708 MobiDBLite consensus disorder prediction 642 665 - -
Seca2g03584 708 MobiDBLite consensus disorder prediction 642 675 - -
Seca2g03584 708 Pfam FAR1 DNA-binding domain 123 203 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03584 Seca-Chr2 111096815 111099909 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03584 MULE 1.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03584 - - tpra:123913749 629.017