Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03565 ATGATCAACGTCCACTCTCGTCACACCATCGTCCCTTCTGAATCCACCCCCAATCAAAAACTCTATTCCTTATGCGAACAAATCAAGCTTCGCACTCACGCTCCTCTCATCTACGTGTATAACAACCCACATGACCAACACAGTGCATCAACCTTCCTTCAGACCCTAACAAACTCCCTTAGCCAAGCTTTGGTTATTTACTATCCACTCGCGGGAAGGTTGAGTTCGATCGAAGGAGCGCGATGGGAACTCAATTGCAACGCCAAGGGAGCACATCTATTAGAAGCCAAATCCGAAGAAATAACCTTAGATGAGTTGGGCGATTTTGTTCCTACCAACTTGGTTCCCCAACTTATACCCAAAATCGATTATACTGTTCCCATTGAAGAGATGCCTCTGCTGTCTGTGCAACTAACCAGGTTCCGTTGTGGTGGTTATACCATGGGCGTGGCCTTATGTCGCGCCGCAATTGACGGAACCTCAGCCATGCGTTTCATGAACGTGTGGGCGAAGCTAGCGCGTGGGGAGCGTTTAGACCCAACAGAAACGCCATGTCACGATCGAACTGCGCTAGATTCACGCAAGCGGTTGCATTCACACAACCATTCAGAGTTTCACGCGCCTCCTGTTTGGTTAGGTGGTTTGGGAGAAACAGAGGAAGTGGTTGCAGTTGTGAAACTCACTGGAGAACAAGTTACAAAGCTTAAGAAGAAGGCTGGTAATACTGCAGCACAAACAAGACCTTATTCAACTTTTGAGGTTATTTCAGGGCACCTTTGGAGGTGTATAAGCAAAGCACGCTATTCAGGAAACGGTTACCAACCTACGACATTGTCAACATTGGTTAATTGTAGGAACCGTTTGAGGCCACCACTTCCTAGCAGTTATGCTGGGAATGCAGCATTTCCTACGGTGACAGAAACATGCTCTTTTGATGAAATTATGCATAGGCCTTTGAGTTATGCAGTTGAGAATGTTAGGAAAGCACTTGAGAGGGTGACACGGGAGTTTGTGATGTCAGCGCTTGATTACATAGATAGGGAGAAGGACATGGAATTGTTGAGGTATAATTTTCACTATCCTGCGCCAAGTGTGCATCAAGGACCGTTCAAAGGGAACCCAAACCTTTTTGTTGTGAGTTGGATGAATTTTTCGTTTAAGGATGCTGATTTTGGGTGGGGGAAGCCTGTTTATTTTGGGCCAGGGTACATGGATTCCGAAGGAAAGGCCTTCCTTCTGAATAATGCTAATGGTGATGGCGTTGTTGTGGCGATTTCTTTGGACGTGTCTCACATGGATGCCTTCAGGAAATTTTTTTACGGTGATATTGAAGAGGTATTTCCCGCTTCCAAACTGTGA 1359 0.4606 MINVHSRHTIVPSESTPNQKLYSLCEQIKLRTHAPLIYVYNNPHDQHSASTFLQTLTNSLSQALVIYYPLAGRLSSIEGARWELNCNAKGAHLLEAKSEEITLDELGDFVPTNLVPQLIPKIDYTVPIEEMPLLSVQLTRFRCGGYTMGVALCRAAIDGTSAMRFMNVWAKLARGERLDPTETPCHDRTALDSRKRLHSHNHSEFHAPPVWLGGLGETEEVVAVVKLTGEQVTKLKKKAGNTAAQTRPYSTFEVISGHLWRCISKARYSGNGYQPTTLSTLVNCRNRLRPPLPSSYAGNAAFPTVTETCSFDEIMHRPLSYAVENVRKALERVTREFVMSALDYIDREKDMELLRYNFHYPAPSVHQGPFKGNPNLFVVSWMNFSFKDADFGWGKPVYFGPGYMDSEGKAFLLNNANGDGVVVAISLDVSHMDAFRKFFYGDIEEVFPASKL. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03565 452 Gene3D - 1 207 IPR023213 -
Seca2g03565 452 Gene3D - 217 441 IPR023213 -
Seca2g03565 452 Pfam Transferase family 2 439 - -
Seca2g03565 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03565 Seca-Chr2 110512321 110513679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03565 2 440 Monolignol Biosynthesis Gene Families AT5G48930 36.062 4.67e-84 263