Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03554 ATGAATGACTCAGACATTCAACCTTCCTATGAAGATCTCAATTCCTATTCCATTGTCACAAACGGAGACAGAACAATTCAAGTCTGTTTCAATAAAACTGTGTCCCATGGTTCTTCCCTTTGGGCAGAAAATACTATAGACACAACACTACCTGCATTTGTTCTACAGTTTGCTCTTGTTCTATCACTCAATCGCATATTCATCATTGCTGCAGAATCAGCCCATGTACCTCGTATTGTTGCCCATGTTTTTACTGGTTTTTTATTAGGTCCATCTGCTATTGGACGTTGGGATAGTTTCGCCAAAACCATATTCCCTTATAAAACCATGTTGCCATTAGAGACAGTGGGAGCTTTGACCCTTGTTTACTATGTGTTCTTGATTGGCTTAGAGGTGGAATTGAAACCAATAACAAGGTGTTATAACAAGAAGGCTATGGTTGTTGCCATTGCTGGAACAATCTTCACCTTACCAATTGGGGTTATCTTGTACTACTTTCTTATCACTGACATGGGAAAAGTACCTGTGTCTTCTTCAGACAACATTAAACACATAAAGGGTGCAATATTATGGGGAATCACCCTTTCTTGCAGCAGTGAGTTCCCTGAGATTGCAAAAATTCTTCAAGACCTAAAGCTTCTGCTAACAGAAAATGGACAATTGGCTCTAACATCTTCTCTTGTTAATGACCTGTTCTCCTTTACCCTTATTCTGTTGGCCCTGACACAATTCTATTATGGTTCTATTTTGTCATTGATCATCACCCTCATGTTTGTGTTGGGGTGTTTTTTTGTGTTTCATCCTCTTGCTAAGTGGCTCATCAACAAGATTGGAAAAGGGGATCGAGATTTCGTTGAGTCACAGATAATAATTGTTCTCCATGTGGTTTTGGTTATTGGACTCTTCTCTGATGGGTTGGGAGCACATTCCATCACAGGTGCTTTCTTTTTAGGAGTTGTGATACCAAAGGGTGCTCTTAACAATGCAATTCAGGACAAGGTGTTTGATTTTGTGTCAGCATTCACGATGCCATTGTTCTTTGTTGTTGTTGGGGAGAGAATTCATGTCCAGGAATTTAATGACTTGAACTTACAGTGGATAACCGTGGTGATTGTTATTGTGCTGGCAATTATTGCAAAGATAGTGTGCATTTTTGCAATCTCATGGTTCTATCAGATGCCTCTTCTTGAAGGATTGTCCCTTGCACTGCTCATGAACACTAAAGGAACTGTGCCATTTGTCATTCTGAGCACCGGCAGAGACAGGCTTGAATTGGATAATCAAACCTTTGGGGTGATGTTATTGTCGTGCTGGTTAATGACAGCTATTGTGGGGCCTATCTTAGCTACTGTGACAAAAACCCTCAGCAAGAGGAATGTTCTTGGGAGCAAAAAACGGAAGAGCGTGCAAGGCACACGGCCAGACTCACCGCTAAGAGTGTTGGCCTGCGTCCACACAAAGCGTGATGCCAATGTTATCATCAACCTTCTCAAAGCATCAAGTCCATCGGTGAGATCTCCAATTCAGGTGTTGGCAGTTGAGTTGATCAAGATGACAATTCGCCCCACTTCATCACTCATCATAAGGGATGCTCGCAAGCCATCTTTTAACTCCCAATGCAGCAAAGTTGATAGCTTCAAGAAAGACAATGGAGGTAAGGACAACCTCATTAGCTTCGACAACCTTAGCCAAGCCATCTTTGCCGAAAAATTAAGGATCATCTCTGACTACAACTCCATGCATAAGGACATCTTAAACCTCTCAAGACGCAGAGGTGTCACCCTCATCCTAACCACTCTCTACAAGCAACCCACCTATGATGGTTTAGGCGCCGGCACCGCCACCGCTAGAGCCGTCAATATCATTAATAGGGACCACACAAGCAAAGACGAGAAGAAAGTGGTGTTGGAGAATCTAGTAAAAGAGGCACCTTGTTGCTTGGCCATATTTGTAGATAGAGGGTTGGGTCAAAAACCCGACAATAATAAGGAAAAACGAATAGCAATGTTCTATATTGGTGGTGAAGATGATCGTGAAGCACTTTCTTACGCTTGGAGGATGAGTAGGAACATGGAGGTCCAGTTAACAGTGGTGCGCCTCGTTTGGAATAGCCCTGATGATGAATTTGATGAAACAGATAGGGTGTATTTGAAGGAGTTTTTGCAACAAGCAAAAGACACGCCGAGGGTGAGGTATTTGGAGAAGGTTGTGAAGGATGAGAAGGAAACAGTGACACTTTTGAATAAGATAGGGAATAAAGGGTTTGATTTATATGTAATTGGGAGAGGGCATGGGAGAAAGATGTCGTTGGCACAAACGGTGGATCCTGTGTTGGAAGAGCCTGCGTTGGGTCCTCTTGGGGATGCTTTGACAGATTTGAACTCTACTGCAGAGACATCCATTTTGATATTGCAAAGACAAGGTGAACAACATGGTGGTGATGATTTGGGAAAACATGAGCGGTCTGCGTCTGCACAACTTTTTGATAATGTGGTTGAGCAGCAAGTGATGTTTCCTCCAGCAGCATATCCGCCAATGGTTTTTAGTCACTATGCTTAA 2559 0.4259 MNDSDIQPSYEDLNSYSIVTNGDRTIQVCFNKTVSHGSSLWAENTIDTTLPAFVLQFALVLSLNRIFIIAAESAHVPRIVAHVFTGFLLGPSAIGRWDSFAKTIFPYKTMLPLETVGALTLVYYVFLIGLEVELKPITRCYNKKAMVVAIAGTIFTLPIGVILYYFLITDMGKVPVSSSDNIKHIKGAILWGITLSCSSEFPEIAKILQDLKLLLTENGQLALTSSLVNDLFSFTLILLALTQFYYGSILSLIITLMFVLGCFFVFHPLAKWLINKIGKGDRDFVESQIIIVLHVVLVIGLFSDGLGAHSITGAFFLGVVIPKGALNNAIQDKVFDFVSAFTMPLFFVVVGERIHVQEFNDLNLQWITVVIVIVLAIIAKIVCIFAISWFYQMPLLEGLSLALLMNTKGTVPFVILSTGRDRLELDNQTFGVMLLSCWLMTAIVGPILATVTKTLSKRNVLGSKKRKSVQGTRPDSPLRVLACVHTKRDANVIINLLKASSPSVRSPIQVLAVELIKMTIRPTSSLIIRDARKPSFNSQCSKVDSFKKDNGGKDNLISFDNLSQAIFAEKLRIISDYNSMHKDILNLSRRRGVTLILTTLYKQPTYDGLGAGTATARAVNIINRDHTSKDEKKVVLENLVKEAPCCLAIFVDRGLGQKPDNNKEKRIAMFYIGGEDDREALSYAWRMSRNMEVQLTVVRLVWNSPDDEFDETDRVYLKEFLQQAKDTPRVRYLEKVVKDEKETVTLLNKIGNKGFDLYVIGRGHGRKMSLAQTVDPVLEEPALGPLGDALTDLNSTAETSILILQRQGEQHGGDDLGKHERSASAQLFDNVVEQQVMFPPAAYPPMVFSHYA. 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03554 852 Gene3D - 585 783 - -
Seca2g03554 852 Pfam Sodium/hydrogen exchanger family 66 448 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca2g03554 852 Gene3D - 51 460 IPR038770 -
Seca2g03554 852 PANTHER CATION/H + ANTIPORTER 29 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03554 Seca-Chr2 110333452 110338664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03554 28 816 Antiporter Super Family AT2G13620 32.567 1.28e-138 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03554 K26731 - psat:127126630 1160.98