LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca2g03551	ATGGTTACAATTTCTCTCAAATACCAGATTGATAAGGTAGTGTCAGACAAAGAGGCGGTTCTTAATGATTTATCAGCTTGTACTACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCAGGTGGGCTTATATCTAAACCAATGGAGGTTAGCAGAATCTGGATGGGGGAGACAGATATTAGCAAGGTTAAGGCGGGATCAAAATCAGATCCAGGTGTACTTATGCTTAAAGAAGGAGTTGGTTTGTCAGTTCTTGCACCTAAACTTTCACTTTCTCCTATGTCCAATTCACTTGTTTCTTGGGCAGAAAAAACATGGGAAATGAACATAAAATCTCTCACACAAGAATATGACATTCTTAAGCACAAAAAACTGAATTCTGACAAAGAAGGAAGGGGAGTTTTGGTGAGAAAATTTGAGGGCAATGAACAAGTTCTGCACTTGCACTGGAGTGGGACTGCATCCACAATATTGGAAATGTTTTCACAATACTATGATAGTAAAGGAGAATGCCATGCCATAAAAAACCAGAAAAACAAATTTGGGCAGGTGATTAAAGATATGGATGACAGTGGCCTTGAACCAATTGCATTTGCTTATAGACAAACACAAGTAGAAGAGCTTGAGCAAGATGAATTGATCTTGTTAGGACTAATAGAGGATGACATCGTGTTAGTGAAAGACATAGCTTCTGAACTGGGAATAGATGTGATAGTAGATGGTATTATGCTTGAAGGAAAAGGATTTCAAGATTTGAATGCCAATGTTAGATCAGACAAAGTGGATCCAGCCCTTTTAATGGGAAGTTTCCGTCCTGAAGATAAGCTTCTCATGGTACAATGCTTACAAGACAAAGGTTATGTGGTAGCATTTGTTGGAAGAAGGTTGAGCCATAATTCAGTTCTAAAGGTAGCTGATGTAGGGATAGTTCATAACTCTCAGAGAGAGAGGGGGGGACCAATTTGA	969	0.3901	MVTISLKYQIDKVVSDKEAVLNDLSACTTMGLVTVICIDVSGGLISKPMEVSRIWMGETDISKVKAGSKSDPGVLMLKEGVGLSVLAPKLSLSPMSNSLVSWAEKTWEMNIKSLTQEYDILKHKKLNSDKEGRGVLVRKFEGNEQVLHLHWSGTASTILEMFSQYYDSKGECHAIKNQKNKFGQVIKDMDDSGLEPIAFAYRQTQVEELEQDELILLGLIEDDIVLVKDIASELGIDVIVDGIMLEGKGFQDLNANVRSDKVDPALLMGSFRPEDKLLMVQCLQDKGYVVAFVGRRLSHNSVLKVADVGIVHNSQRERGGPI.	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca2g03551	322	Gene3D	-	46	223	IPR023299	GO:0000166
	Seca2g03551	322	Gene3D	-	224	310	IPR023214	-
	Seca2g03551	322	PANTHER	CATION TRANSPORTING ATPASE	222	314	-	-
	Seca2g03551	322	SUPERFAMILY	Metal cation-transporting ATPase, ATP-binding domain N	93	220	IPR023299	GO:0000166
	Seca2g03551	322	SUPERFAMILY	HAD-like	223	312	IPR036412	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca2g03551	Seca-Chr2	110264181	110265232	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca2g03551	2	310	Primary Pumps ATPases	AT3G63380	32.486	8.41e-46	164

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca2g03551	K01537		-	gmx:102661547	362.459