Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03491 ATGGATGATCATGTTTCAATTCAGATAGATGTCTACAAAGATAATGAAACAAATTGTAGTAAAATTCTCTCTTTTTCATATGACCAGGGTTCTTTACAATTTGGAACATTTCAGAGTAATGAAGTGCATACAGGATTGGATGTTACTTGTTCAGAATCCTCTTCATTTAGTGATATGGGTAATTCAGAAAATGGACGTGATAATGAAGAAATAGAGACACCAATAATTGTGACTAAGGAGCAAGATCAATATGAGCCAAAAATTGGTATGATATTATCAAATGAAGATGAAGCTTATAAATTCTATAATGAGTATGCTAAATTCATCGGGTTTACTGTGAGAAGAAACCAATATCGAAGATTGGCAGATGGAACTTTAAGGCAAAGGACATTTGTTTGTGGAAGAGAGGGGCATAGAAAGCCAAAGGACCCTTCACATGTGAGCAAGATTAATAGGAAAGAAACAAGAACTGGTTGTCCAGCCATGATATGCTTTACCATTGAAAAGGATACTTGGATTGTTTCTAAATTCATTTCTGATCATAATCATGATCTAGAGAACTCTTCTGTTCGGGCTATGTTACGATCACAAAGACATGTAGATGAAGCACATGCTAATATAATTGAAGTTATGGACAATGCTGGTATCAAACCGTGTGGTATGTATTCATATTTTGTTGAAGCTGCTGGAGGAGTCCAAAATGTTGGGTTTTTAAAATCTGATTGTGACAATTTTTTACAAAGCAAGAGAAACAACACTCTTGAAGCAGGAGACGCACAAAGTGTTATTAACCATTTCAAAAGTTTGCAAGCAAATGATCCATCCTTCTTCTACACAATACAAGTAGATTATGAAAATCGCATGACTAACTTTTTTTTGGAGAGATGGCATATCAAGGACAGATTATTGTCACTTTGGAGATGTAGTCATTTTTGA 936 0.3462 MDDHVSIQIDVYKDNETNCSKILSFSYDQGSLQFGTFQSNEVHTGLDVTCSESSSFSDMGNSENGRDNEEIETPIIVTKEQDQYEPKIGMILSNEDEAYKFYNEYAKFIGFTVRRNQYRRLADGTLRQRTFVCGREGHRKPKDPSHVSKINRKETRTGCPAMICFTIEKDTWIVSKFISDHNHDLENSSVRAMLRSQRHVDEAHANIIEVMDNAGIKPCGMYSYFVEAAGGVQNVGFLKSDCDNFLQSKRNNTLEAGDAQSVINHFKSLQANDPSFFYTIQVDYENRMTNFFLERWHIKDRLLSLWRCSHF. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03491 311 Pfam FAR1 DNA-binding domain 100 185 IPR004330 -
Seca2g03491 311 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03491 Seca-Chr2 108447647 108449470 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03491 FAR1 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03491 - - rcn:112203823 216.083