Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03485 ATGGTTTTGCTGTGGCCACACACTAAGACCATGGACTTCTTAACACTCATCACTTTTGCACTCTTGTTAATGCCTGCAATCTCTTCTTCCCAGTATCTTAGGAACAACATACTACTCAGTAACCGTAAGATATTACCCAAACAGGAAAACAATATTACCTCTTACGCTGTGATATTTGATGCGGGTAGCACTGGCAGTCGTGTGCATGTCTTCCATTTTGACCAGAACTTAGATCTCCTTCAAATTGGCGAAGATCTTGAGTTTTATGATAAGGTCACACCCGGTTTGAGTTCATACGCAGATAATCCTGAAGAAGCCGCAGAGTCTCTTATTCCTCTTTTAGAGGAAGCAGAAAATGTGGTCCCTGACGACATGTACTCCAAGACACCCGTTAGGCTTGGGGCAACTGCAGGATTAAGGCTTTTGGATGGGAATGCTTCTGAACTGATACTGCAAGCGGTTAGGGATATGCTCAGCAACAGAAGTACATTCAACGTTCAATCTGATGCAGTATCTATTCTTGATGGAACCCAAGAAGGTTCTTATCTGTGGGTGACAATTAATTATCTTTTGGGGAAGTTGGGAAAAAGCTATTCACAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGACATATGCTGTCTCAAGAAACACAGCTAAAAATGCTCCAATTGTTCCAGATGGAGAGGATCCATACATAAAGAAAGTTGTACTCAAGGGAAAGCAATATAATCTCTATGTTCACAGTTACTTGCACTTTGGCAAAGAAGCATCTCGTGCAGAGATGTTGAAGGTCACTAATGGTTCTGCTAACCCTTGCATTTTAGGTGGCTATGATGGTACCTATACATATTCCAAGGTGGAGTATAAGGCCTCATCCCCTGCATCAGGCTCCAACTTTGAAGAATGCAGAGAGATAGTTCTTAAGGCTCTCAAAGTGAATGAGCCATGTCCCTATTCAAATTGCACTTTTGGTGGGATATGGAAAGGTGGAGGAGGAAATGGACAGAAAAAGCTTTATGTCACTTCGTCTTTCTATTACGTGCCCATGGATGTATATATCTATTACTTTAATTTTATTTTCTTAAAGAATTTTTTTCTAATTTTATATTTTATTACTTTTTTCAAATTAAGATATTCCTCAAGCCTTACTAATTATGTTATTTTGTTTTCTCATATATATAGGCTGGTATTGTTGATTCTGACAAACCCAACTCCAAAATTCGTATTAAGGATCTGA 1251 0.3941 MVLLWPHTKTMDFLTLITFALLLMPAISSSQYLRNNILLSNRKILPKQENNITSYAVIFDAGSTGSRVHVFHFDQNLDLLQIGEDLEFYDKVTPGLSSYADNPEEAAESLIPLLEEAENVVPDDMYSKTPVRLGATAGLRLLDGNASELILQAVRDMLSNRSTFNVQSDAVSILDGTQEGSYLWVTINYLLGKLGKSYSQTVGVVDLGGGSVQMTYAVSRNTAKNAPIVPDGEDPYIKKVVLKGKQYNLYVHSYLHFGKEASRAEMLKVTNGSANPCILGGYDGTYTYSKVEYKASSPASGSNFEECREIVLKALKVNEPCPYSNCTFGGIWKGGGGNGQKKLYVTSSFYYVPMDVYIYYFNFIFLKNFFLILYFITFFKLRYSSSLTNYVILFSHIYRLVLLILTNPTPKFVLRI. 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03485 416 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 18 352 IPR000407 GO:0016787
Seca2g03485 416 CDD NBD_sugar-kinase_HSP70_actin 57 216 - -
Seca2g03485 416 Gene3D - 55 174 - -
Seca2g03485 416 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 55 184 - -
Seca2g03485 416 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 174 189 IPR000407 GO:0016787
Seca2g03485 416 Gene3D Exopolyphosphatase. Domain 2 175 353 - -
Seca2g03485 416 Pfam GDA1/CD39 (nucleoside phosphatase) family 49 357 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03485 Seca-Chr2 108191109 108196934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03485 54 350 Calmodulin-binding Proteins AT3G04080 57.718 3.07e-111 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03485 K14641 - gmx:100781628 536.569