Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03484 ATGGTTTTGCTCTGTCCACGAACTAAGAGCATGGACTTCCTTACTCTCATAACTTTTCTAGTACTCTTGTTAATGCCTAGTGGAATCTCTTCTTCCCAGTTTCTTGGCAACAATATACTACTCACTCACCGTAAGATATTACCCAAACAAGAATCCATTACCTCTTACGCTGTCATCTTTGATGCTGGTAGCACTGGCAGTCGTGTGCATGTTTACCATTTTGATCAGAACTTAGATCTTCTTCACATTGGCACAGACCTTGAGTTTAATAATAAGATCAAGCCAGGTTTGAGTGCATACGCGGATGATCCTGAAGGAGCCGCAGAATCTCTGATTCCACTTTTAGAAGAAGCACAAAGTGTGGTCCCTGAGGACATGCATCCTAAGACACCCCTTAAGCTTGGAGCAACTGCAGGTTTAAGGCTTTTGGATGGGGATGCTTCTGAAGAGATATTGCAAGCGGTTCGGGATATGTTCAACAACAGAAGTACTCTGAATGTTCAATCAGTGGATATTATTGATGGAACCGAAGAAGGTTCTTATATGTGGGTGACAGTTAACTACCTTCTGGGGAAGTTAGGAAAAAGGTTTCAAAAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCTGTCTCAAGAAACACAGCTAAAAACGCTCCAATTGCACCTGATGGAGAGGATCCATACATAAAGAAGCTTGTGCTCAAGGGAAAGAAATATGACCTCTATGTTCACAGTTACTTGCGCTATGGCAGAGAAGCATCTCGTGTTCAGATTTTGAATGTCACTGCTGGTTCTGCTAGCCCTTGCCTTCTAGCTGGCTTTAAAGGGACCTACACATATGCAGGAGAGGAATATAAAGCCATTGGCCCTACTTTTAGCTCCAGTTTTGACGAATGCAGAGAAACAGTGCTTAAGGCTCTCAAAGTGAATGCGCCATGTCCCCATAAGAACTGCACTTTTGGGGGAATATGGAACGGTGGAGGTGGCAGTGGTCAGAGAAACCTCTTCCTTGCTTCATCTTTCTATTACCTGCCTGCCGACGTTGGCATTATTGATCCAAATAAGCCCAATTCCGATATTCTCATAGAGGATCTGAAGACTGAAGCTAAGAGAGCTTGTCAAACAAAATTTGAGGATGCCAATTCCACTTATCCACTTCTTGCAGAGTCAAGACTTCCATATGTATGCATGGATCTTACATATTCGTACACGTTGTTGGTTGATGGATTTGGGCTTGATCCATTCCAAGTGGTTACAGTGGGGAAGGAAATTGAATATCAAGATTCTGTGGTGGATGCAGCATGGCCTCTAGGCACTGCCATAGAAGCCATATCAGCATTGCCTAAATTTAACCGACTAATGTATTTTATTTAA 1395 0.4294 MVLLCPRTKSMDFLTLITFLVLLLMPSGISSSQFLGNNILLTHRKILPKQESITSYAVIFDAGSTGSRVHVYHFDQNLDLLHIGTDLEFNNKIKPGLSAYADDPEGAAESLIPLLEEAQSVVPEDMHPKTPLKLGATAGLRLLDGDASEEILQAVRDMFNNRSTLNVQSVDIIDGTEEGSYMWVTVNYLLGKLGKRFQKTVGVVDLGGGSVQMAYAVSRNTAKNAPIAPDGEDPYIKKLVLKGKKYDLYVHSYLRYGREASRVQILNVTAGSASPCLLAGFKGTYTYAGEEYKAIGPTFSSSFDECRETVLKALKVNAPCPHKNCTFGGIWNGGGGSGQRNLFLASSFYYLPADVGIIDPNKPNSDILIEDLKTEAKRACQTKFEDANSTYPLLAESRLPYVCMDLTYSYTLLVDGFGLDPFQVVTVGKEIEYQDSVVDAAWPLGTAIEAISALPKFNRLMYFI. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03484 464 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 173 188 IPR000407 GO:0016787
Seca2g03484 464 CDD NBD_sugar-kinase_HSP70_actin 58 215 - -
Seca2g03484 464 Gene3D Exopolyphosphatase. Domain 2 174 432 - -
Seca2g03484 464 Pfam GDA1/CD39 (nucleoside phosphatase) family 54 455 IPR000407 GO:0016787
Seca2g03484 464 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 15 453 IPR000407 GO:0016787
Seca2g03484 464 FunFam Apyrase 1 174 432 - -
Seca2g03484 464 Gene3D - 56 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03484 Seca-Chr2 108157846 108162275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03484 55 453 Calmodulin-binding Proteins AT3G04080 53.731 4.29e-149 431