Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03481 ATGGACTTCCTAACCCTCAACACTTTTCTTCTCTTGCTAATGCCTTTAATCTCCTCCTCCCTGTATTTTGAGAACAACATACTACTCAGTAACAGTCACCGTAAGATATTACCCAAACGACAATCCATTACCTCTTACGCTGTGATCTTTGATGCTGGTAGCACTGGCAGCCGTGTGCATATCTTCCATTTTGACCACAACTTGGATCTCCTTCACTTTGGCAAACATCTTGAGTTTTATGATATGATCACACCCGGTTTGAGTGCATACGCAGATAATCCTAAACAAGCCGCAGAATCTCTGGTTCCTCTTTTAGAGGAAGCAAAAAGTGTGGTCCCTGACAAGTTGCACTCCAAGACACCCGTTAGGCTTGGTGCAACTGCAGGTTTAAGGCTTTTGGATGGGGATGCTTCTGAAAAGATATTACAAGCGGTTAGAGATATGCTCTGCAACAGAAGTACCTTGAACATTCAACCTGATGCAGTAGCTGTTATTGATGGAACCAAAGAAGGCTCTTATCTATGGGTGACCATTAACTATCTATTAGGGAACTTGGGAAAAAAGTTTTCAAAAACACTGGGAGTAGTTGATCTTGGAGGTGCATCAGTTCAAATGACATATGCTGTCTCAAGGGACACAGCTAAAAAAGCTCCCAAAGTGAAAGATGGAGATGATCCATACATAAAGAAAGTTGTACTCAAGGGGAAGAAATATAACCTCTATGTTCACAGTTATTTGCGCTATGGTAGAGACGCATCTCGGGCCCAGATTTTCAAGGTCACTGATGGTTCTCCTAACCCATGCATTTTAGCTGGCTTTGATGGGACATACAAATATTCGAGAGAAGAATATAAGGCCTTTGCCCCTACATCTGGCTCCAACTTTGAAGAATGCAGAAAGATAGTTCTTAAGGCTCTCAAAGTGAATTCTCCATGTCCCCATCCGAATTGCACATTTGGTGGAATATGGAACGGTGGAAGGGGAAGTGGACAGAAAGATCTTTTTTTTACTTCTTCCTTCTTTTACCTATCCGCAGATGTATCTATTATTTTAAATAAACCCAATTCCAAAATTCATCCTGTGGATCTTGAGAATGAAGCTAAGCGTGCTTGTGAAACAAATCTTGAGGATGCCAAATTCACTTATCCACTTCTTGCAAAGACGAGACTTCCATATGTATGCATGGATCTTATGTATCAGTACACATTGCTCGTTGATGGATTTGGCCTGGATCCATTACAAGAGATTACGGTGGCGAAGGCAATTGAATATCAAGATGCTCTTGTGAAAACAGCATGGCCTATAGGCAATGCCATTGAAGCCATATCATCGTTGCCTAAATTTGAGAGATTAATGTATTTTATTTAA 1368 0.4101 MDFLTLNTFLLLLMPLISSSLYFENNILLSNSHRKILPKRQSITSYAVIFDAGSTGSRVHIFHFDHNLDLLHFGKHLEFYDMITPGLSAYADNPKQAAESLVPLLEEAKSVVPDKLHSKTPVRLGATAGLRLLDGDASEKILQAVRDMLCNRSTLNIQPDAVAVIDGTKEGSYLWVTINYLLGNLGKKFSKTLGVVDLGGASVQMTYAVSRDTAKKAPKVKDGDDPYIKKVVLKGKKYNLYVHSYLRYGRDASRAQIFKVTDGSPNPCILAGFDGTYKYSREEYKAFAPTSGSNFEECRKIVLKALKVNSPCPHPNCTFGGIWNGGRGSGQKDLFFTSSFFYLSADVSIILNKPNSKIHPVDLENEAKRACETNLEDAKFTYPLLAKTRLPYVCMDLMYQYTLLVDGFGLDPLQEITVAKAIEYQDALVKTAWPIGNAIEAISSLPKFERLMYFI. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03481 455 Gene3D Exopolyphosphatase. Domain 2 166 423 - -
Seca2g03481 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 44 446 IPR000407 GO:0016787
Seca2g03481 455 CDD NBD_sugar-kinase_HSP70_actin 48 207 - -
Seca2g03481 455 Gene3D - 46 439 - -
Seca2g03481 455 FunFam Apyrase 1 166 423 - -
Seca2g03481 455 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 165 180 IPR000407 GO:0016787
Seca2g03481 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 10 445 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03481 Seca-Chr2 107781240 107788073 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03481 45 444 Calmodulin-binding Proteins AT3G04080 54.975 5.26e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03481 K14641 - gmx:100781628 696.812