Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03480 ATGTTCAGCAACAGAAGTACCCTGAATGTCCAACCTGATGCAGTAGCTATTATTGATGGAACCCAAGAAGGTTCTTATCTGTGGGTGACAGTTAATTATCTACTGGGAAAGTTGGGAAAGAAGTTTTCAAAGACAGTGGGAGTAATTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCCGTCTCAAGGAACACAGCGAAAAATGCTCCAAAAGTACCAGATGGAGAGGATCCATACATAAAGAAGATTGTACTCAAGGGAAAACAATATGACCTCTATGTTCACAGTTACTTGCACTTTGGCAGAGAAGCATCTCGTGCAGAGATTTTGAAAGTCACTGATGGTTCTGCTAACCCTTGCATTTTAGCTGGCTTTGATGGTACCTACATATATTCAGGAGCAGAGTATAAGGCCTCAGCCCCTGCATCGGGCCCTAATTTAGAAGAATGCAGAGAGATAGTTCTTAAGGCTCTGAAAGTGAATGAGCCATGTCCCCATCCTAATTGCACTTTTGGAGGGATATGGAACGGTGGAGGAGGAAGTGGACAGAAAACTATTTTTGCTGCTTCATCTTTCTATTACCTTTCTGCAGATATTGGAATCGTTGATCCAAACAAACCCAATTCCAAAATTCGTCCGGTGGATCTTGAGAGTGAAGCTAAGAGAGCTTGTGAAACAAAACTTGGGGATGCCAAATCCATATATCCACTTCTTGCGGAGAATATACTTCCATATGTATGCATGGATCTTGTGTATCAGTACACATTGCTCGTTGAAGGATTTGGACTAGATCCATGGCAAGAGATTACAGTGGGGAAGGAAATTGAATATCAGGATGCAATTGTGGAAGCCGCATGGCCTTTAGGCAATGCTATAGAAGCCATATCATCATTGCCTAAATTTGAGCGATTAATGTATTTTATTTAA 930 0.4151 MFSNRSTLNVQPDAVAIIDGTQEGSYLWVTVNYLLGKLGKKFSKTVGVIDLGGGSVQMAYAVSRNTAKNAPKVPDGEDPYIKKIVLKGKQYDLYVHSYLHFGREASRAEILKVTDGSANPCILAGFDGTYIYSGAEYKASAPASGPNLEECREIVLKALKVNEPCPHPNCTFGGIWNGGGGSGQKTIFAASSFYYLSADIGIVDPNKPNSKIRPVDLESEAKRACETKLGDAKSIYPLLAENILPYVCMDLVYQYTLLVEGFGLDPWQEITVGKEIEYQDAIVEAAWPLGNAIEAISSLPKFERLMYFI. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03480 309 FunFam Apyrase 1 19 277 - -
Seca2g03480 309 Pfam GDA1/CD39 (nucleoside phosphatase) family 4 301 IPR000407 GO:0016787
Seca2g03480 309 Gene3D Exopolyphosphatase. Domain 2 19 277 - -
Seca2g03480 309 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 3 299 IPR000407 GO:0016787
Seca2g03480 309 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 18 33 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03480 Seca-Chr2 107738439 107741963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03480 1 298 Calmodulin-binding Proteins AT3G04080 57.191 8.99e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03480 K14641 - gmx:100781628 528.865