Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03460 ATGCCAAAGCGCACACACACACACAGGTTCGCTGTATTACATTATATACACACTTCAGTTCAGTCTTATATCTGCACGTACTCAAAAATAATGGGAACTTCTTGTGAAGAAGCTTCAACTCTTCTTCAAGACCTGAAGGTGACCATTCACGAAACTTCAATCGTTTTTCCATCCCAGAAAACAGAGAAGAAGTCCCTGTTCTTATCAAACATAGACAAGGTCCTCAATTTCGACGTGGAAACGGTTCACTTCTTTGCTGAAAACAAAGATTTTCCTCCCCAAATAGTGGCCGAGAAGCTAAAGAACGCCCTTGAAGATGCTCTAGTGGCTTATGACTTCTTAGGTGGAAGATTGAAGCTGAACTCTGAAACAAGCAGGTTAGAGATGGATTGCAATGCAGAAGGTGCTGGTTTTGTTGTGGCTTCTAGTGAATACAAATTGGATCAAATAGGGGACTTGGTTTATCCCAATCCAGCTTTTGCACAATTTGTTCACAAGACTAAGGATTTCCTTAAACCAGGTGATCAGCCACTATGTGTTGTCCAGCTGACATCCTTCAAGTGTGGTGGCTTTGTAATTGGTTTCACAACTAGCCATACCACCTTTGATGGGCTTAGCTTCAGGATTTTCTTGGACAACCTTGCTGCATTGGCTTCTAACAAGCCACTAGCTGTGACACCCTGCCATGACAGGCAACTCCTAGCCGCACGATCTCCTCCACGTGTCAGCTTCCCGCACCCTGAACTGATCAAGCTCGATAACCTCCCCTCAGGCCTTGAATCCGGTGTCTTTGAGGCCTCCACAGAAGAACTTGACTTCAAGGTTTTTAGGCTAACCTCTAACAATATCATGAATCTCAAGGAGAATGCTAAGACCAATAATAGTGGGACACGTGTCACCGGCTTTAACGCTGTCACCGCTCATATATGGAAATGCAAGGCTTTATCTGGACCCTATGATCCTAATAGGTCATCCACTATACTCTATGCTGTGGATATTCGTTCAAAATTGAACCCTCCATTGCCCAAATCATATGCTGGGAATGCTGTTTTAACGGCACATGCTACTGCAAAGTGTGAGGAATTGGAAAAGGGTTCATTCTCAAGGTTGGTGGAGATGGTGGCAGAGGGTGGAAAGAGAATGAGTGATGAGTATGTAAAGTCTATTATAGATTGGGGAGAGTTGTATAATGGTTTTCCAAATGGTGAGGTTTTGGTGTCTTCATGGTGGAGATTAGGGTTTGAAGAAGTGGAGTATCCATGGGGAAAGCCAAAGTTTTGTTGTCCTGTGGTGTATCATAGGAAGGATATTATACTGCTGTTTCCTCCTATTGGTGGTGGTGGTGATGATGGGGTAAATATTATAGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTTGAGAGTCTCTTTTACAAGTTCTTGATTTGA 1428 0.4328 MPKRTHTHRFAVLHYIHTSVQSYICTYSKIMGTSCEEASTLLQDLKVTIHETSIVFPSQKTEKKSLFLSNIDKVLNFDVETVHFFAENKDFPPQIVAEKLKNALEDALVAYDFLGGRLKLNSETSRLEMDCNAEGAGFVVASSEYKLDQIGDLVYPNPAFAQFVHKTKDFLKPGDQPLCVVQLTSFKCGGFVIGFTTSHTTFDGLSFRIFLDNLAALASNKPLAVTPCHDRQLLAARSPPRVSFPHPELIKLDNLPSGLESGVFEASTEELDFKVFRLTSNNIMNLKENAKTNNSGTRVTGFNAVTAHIWKCKALSGPYDPNRSSTILYAVDIRSKLNPPLPKSYAGNAVLTAHATAKCEELEKGSFSRLVEMVAEGGKRMSDEYVKSIIDWGELYNGFPNGEVLVSSWWRLGFEEVEYPWGKPKFCCPVVYHRKDIILLFPPIGGGGDDGVNIIVALPPKEMEKFESLFYKFLI. 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03460 475 Gene3D - 263 473 IPR023213 -
Seca2g03460 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 53 470 - -
Seca2g03460 475 Pfam Transferase family 45 471 - -
Seca2g03460 475 Gene3D - 43 250 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03460 Seca-Chr2 106683156 106687383 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03460 45 472 Monolignol Biosynthesis Gene Families AT5G48930 28.982 1.79e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03460 K13065 - gmx:100780971 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03460 2 106683156 106687383 Seca2g03460 2 106683156 106687383 PCT