Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03455 ATGGTTGTAACAAATTGTTATACGATTTTGTTGTACAAATTAAATTTCTCATCATTGAATCCTCTAATTTTCCGTCTTTCCTCATATCAATTCCGTCTTTCCTCATATCAATTCGTGTCACAATCTCAACCATTCACGGTTTTAATGTTTATATATGAAATTAACTTAAAGAATGCAGTTATGGACATGAAACAGGGTGCATATGCCTCCCTGAAGATATCACATATATATAAGGGTCAAGGCCAAAGCACACATACACACGTTCTCTATATTACATTATATACACACTTTAGTTCAGTCCTATATCTGTACTCAAAAGTGATGGGAACTTCATGTGAAGAAGCTCCAACTCTTCTTCAAGACCTGAAGGTAACCATTCACGAAACTTCAATCATTTTTCCATCCAAAAAAACAGAGAAGAAGTCCTTGTTCTTATCAAACATAGACAAGGTCCTCAATTTCGACGTGAAAACGGTTCACTTCTTTGCTGCAAACAAAGATTTTCCTCCCCAAATAGTGGCCGAGAAGCTGAAGAATGCCCTTGAAGATGCTCTAGTGGCTTATGACTTCTTAGGTGGAAGATTGAAGCTGAACTCTGAAACAAGCAGGTTAGAGATGGATTGCAATGCAGAAGGTGTTGGTTTTGTTGTGGCTTCTAGTGAGTACAAATTGGATCAGATAGGGGACTTAGTTTATCCCAATCCAGCTTTTGCACAATTTGTTCACAAGACTAAGGATTTCCTTAAACCAGGTGATCAGCCACTATGTGTTGTCCAGCTGACATCCTTCAAGTGTGGTGGCTTTGTAATTGGTCTCACAATTAGCCATACCACCTTTGATGGGCTTAGCCGCAGGATTTTCTTGGACAACCTTGCTGCATTGGCTTCTAACAAGCCACTAGCTGTGACACCCTGCCATGACAGGCAACTCCTAGCCGCACGATCTCCTCCACGTGTCAGCTTCCCCCACCCTGAACTGATCAAGCTCGAATCAGGCCTTGAATCCGGTGTCTTTGAGGCCTCCAGGGAAGAACTTGACTTCAAGGTTTTTAGGCTAACATCTCACAATATCATGAACCTCAAGGAGAATGCTAAGACCAATAATAGTGGGACACGTGTCACCGGCTTTAACGCTGTCACCGCTCATATATGGAAATGCAAGGCTTTATCTGGACCCTATGATCCTAACAGGTCATCCACTATACTCTATGCTGTGGATATTCGTTCAAAATTGAACCCTCCATTGCCTAAATCGTATGCTGGGAATGCTGTTTTAACGGCATATGCTACTGCAAAGTGTGAGGAATTGGAAAATAGTTCATTCTCAAGGTTGGTGGAGATGGTGGCAGAGGGTGTAAAGAGAATGAGTGATGAGTATGTAAGGTCTATTATAGATTGGGGAGAGTTGTATAATGGTTTTCCAAATGGAGAGGTTTTGGTGTCTTCATGGTGGAGATTAGGGTTTGAAGAAGTGGAGTATCCATGGGGAAAGCCAAAGTTTTGTTGTCCTGTGGTGTATCATAGGAAGGATATTATACTGCTGTTTCCTCCTATTGGTGGTGCTGGTGGTGATGGGATAAATATTATAGTGGCTCTTCCTCTTAAGGAAATGGAAAAATTCGAGAGTCTCTTTTACAAGTTCTTGATTTGA 1650 0.4127 MVVTNCYTILLYKLNFSSLNPLIFRLSSYQFRLSSYQFVSQSQPFTVLMFIYEINLKNAVMDMKQGAYASLKISHIYKGQGQSTHTHVLYITLYTHFSSVLYLYSKVMGTSCEEAPTLLQDLKVTIHETSIIFPSKKTEKKSLFLSNIDKVLNFDVKTVHFFAANKDFPPQIVAEKLKNALEDALVAYDFLGGRLKLNSETSRLEMDCNAEGVGFVVASSEYKLDQIGDLVYPNPAFAQFVHKTKDFLKPGDQPLCVVQLTSFKCGGFVIGLTISHTTFDGLSRRIFLDNLAALASNKPLAVTPCHDRQLLAARSPPRVSFPHPELIKLESGLESGVFEASREELDFKVFRLTSHNIMNLKENAKTNNSGTRVTGFNAVTAHIWKCKALSGPYDPNRSSTILYAVDIRSKLNPPLPKSYAGNAVLTAYATAKCEELENSSFSRLVEMVAEGVKRMSDEYVRSIIDWGELYNGFPNGEVLVSSWWRLGFEEVEYPWGKPKFCCPVVYHRKDIILLFPPIGGAGGDGINIIVALPLKEMEKFESLFYKFLI. 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03455 549 Pfam Transferase family 122 545 - -
Seca2g03455 549 Gene3D - 120 327 IPR023213 -
Seca2g03455 549 Gene3D - 337 547 IPR023213 -
Seca2g03455 549 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 131 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03455 Seca-Chr2 106551545 106554811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03455 122 546 Monolignol Biosynthesis Gene Families AT5G48930 29.399 6.74e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03455 K13065 - gmx:100780971 705.671