LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca2g03435	ATGAGTGATGATAATGTATTTGGAAAGATAGATGGTGAAGAGGTTGTTGGTGGAAAGGGTGAGGGTGAAGAAGTTGTTAGTGGAAAGGTAAATGGTGAAGAAGATGTTGGTGGAAAGCTGGATGAGGAAGATGTTGGTGGAAAGGTAGATGGTAAAGAAGAGTATAAAAAAATGTGGCAGTTAACAAGTGAAGACATACAGGGGCTTGAATTTGGTTCTGAGGAAGAAGCATATGTTTTCTATTCCAACTATGCTCGGTGCCATGGTTTTGCTGTAAGAAAAGATGATGTAGGTTATATTGGCAGAGGGTCTGGCAAAGTTAAAGTGATGCGTCAATTTGTTTGTAATAGAGAGGGGTTAAGGAATAAAAAACATTTGGAGAGGGTGGATCGAAAAAGAGAGTCTAAGGCTTTAACTCGAAGTAATTGTCATGCTAAGCTTTGTGTTCATTTAGACTTGAGGTATGGGAAGTGGGTAGTGATTAGCTTTGAGGAAAGTTATAATCATGTCCTAACCCCTCCTCAATTTGTTCATCTTATGCCTTCGTATCGTGGCTTGACCGAAGGGGATAAAGCTCAAGTGGATGCATTACATTCTCATGGGGTTAGGCCATGTCAAATAATGGGCTACCTATTGGATCAAAAGGGAGGTTATGCCAATGTAGGATTTTGCAAAAAGGATTTATACAACTACATAGATGAGGTCAAGCATGGTAAGATTAAAGATGGTGATGCAATGGCTGCATTAAGTTATTTGCAAGGAAAAGTAGACAATGAACCAATGTTTTTCTCTAGGTTTCTATGTTCTGATGGTGGTAAATTGACCCACCTATTTTGGGCTGATGGAATTAGTCGTGCTGATTATTAA	867	0.3922	MSDDNVFGKIDGEEVVGGKGEGEEVVSGKVNGEEDVGGKLDEEDVGGKVDGKEEYKKMWQLTSEDIQGLEFGSEEEAYVFYSNYARCHGFAVRKDDVGYIGRGSGKVKVMRQFVCNREGLRNKKHLERVDRKRESKALTRSNCHAKLCVHLDLRYGKWVVISFEESYNHVLTPPQFVHLMPSYRGLTEGDKAQVDALHSHGVRPCQIMGYLLDQKGGYANVGFCKKDLYNYIDEVKHGKIKDGDAMAALSYLQGKVDNEPMFFSRFLCSDGGKLTHLFWADGISRADY.	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca2g03435	288	PANTHER	OS01G0519700 PROTEIN	64	288	-	-
	Seca2g03435	288	Pfam	FAR1 DNA-binding domain	80	172	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca2g03435	Seca-Chr2	105934059	105940119	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca2g03435		FAR1	3.4e-18	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca2g03435	-		-	ccaj:109792835	299.671