Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03404 ATGTTGATTCCTTTTGTATTGAGGTTGTTGGGCTTATACTGTGATTACTATGGCTGTCATAGAAGTATAAGTGGAATTGGTGTTTTTGTTGTTGCATATGTGGAGCCTAGCATACCGCCTGTGCAAATTGATCACAATCAGCTTTTGATCAATGGAGAATTTGTGAATGCAATGCAACTTCTGGTTCCCATATCAAGCAGTGACAAAGTTCCTGTTATAATAGTGTTTGGAAACTCCTCTGTTGATTCAGGCATAAATGTTCTTTATGGAGTATGGATCCTTTCTACTCCTTATGCTACCAAAGAAGGTGGATGGATTGGGCTTTCTTTCTTGTTCATTTTTGGATTTATTTCCTTCTATACTAGGTTGCTCTTGTGTACCTGCTTGGACAGTGAGCCTGGTCTTGAGACATACCCTGACATTGGCCAAGCTGCTTTTGGTACCACTGGACGTATTTTCATTTCAGTAGTCTTCATGTTGATCTCTACTCTTACTTGA 498 0.3956 MLIPFVLRLLGLYCDYYGCHRSISGIGVFVVAYVEPSIPPVQIDHNQLLINGEFVNAMQLLVPISSSDKVPVIIVFGNSSVDSGINVLYGVWILSTPYATKEGGWIGLSFLFIFGFISFYTRLLLCTCLDSEPGLETYPDIGQAAFGTTGRIFISVVFMLISTLT. 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03404 165 Pfam Transmembrane amino acid transporter protein 85 159 IPR013057 -
Seca2g03404 165 PANTHER OS05G0424000 PROTEIN-RELATED 86 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03404 Seca-Chr2 105056141 105058429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03404 80 160 Amino Acid or Auxin Permease AAAP Family AT2G39130 70.370 1.10e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03404 K15015 - lja:Lj5g3v1806960.3 107.071