Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03383 ATGGAGTTTAATACTATACATCAAGCTCGAGTTTTTTGGACAAATTATGGTGGAATGGTTGGCTTTGATATAAGACAATTGTATGCGAATAAGAGTAAAGTGGACCAGCGTGTGAATAGCTTGCGACTTGTGTGTGCAAAGGAGGGTCATCGAAGACAAGATAAGCGAGATTATTTAACACAAATTCCTCGTGCAGAAACAAGAACAGGTTGTCAAGTAGGAATGACACTCAAGTTAGTACGTGAAACTGGAAAGTATGTGATATATGATCTTGATCTTGAGTTGAATCACAATCATATTTTGCAAACTTCAGAAACTACACATATGATGCCTTCACAGAGAAAGATTTCAGAAGTGCAAGCTTTGCAAATTGACTTGGCCGATGACTCTGGTATAAGACCAAAAGAAACACATGAGCTGATTAGTAAGAAAGTAGGTGGGAAAGATGTCCTTGGATATACAAACAAGATCAAAAAACATATCTTCGGAGCAAACGAAAGCGAGATTTGGCATATGGTGAGGCTGGAACCTTATTAA 537 0.3799 MEFNTIHQARVFWTNYGGMVGFDIRQLYANKSKVDQRVNSLRLVCAKEGHRRQDKRDYLTQIPRAETRTGCQVGMTLKLVRETGKYVIYDLDLELNHNHILQTSETTHMMPSQRKISEVQALQIDLADDSGIRPKETHELISKKVGGKDVLGYTNKIKKHIFGANESEIWHMVRLEPY. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03383 178 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 146 - -
Seca2g03383 178 Pfam FAR1 DNA-binding domain 12 101 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03383 Seca-Chr2 104177066 104178188 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03383 FAR1 1.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03383 - - adu:107484096 229.565