Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03355 ATGAAATTCTCATGGAAATCGATCTTTCCTAGTTGTTATAAGGGTGAGTACTCCTCACCCATGCCCACCAAAGTGGTAGCTACAATGGCTAGTTCTTTAAACATGATCTCTGTCACGGATTTGAGTTTTCCAAGTGCTACCACTCTTTCAGAGGATCTCTCTGTTTCTCTAGCAGGATCTAACCTGCATGTTTTCACACTCGCTGAGCTCAAGATTATCACACAGACCTTCTCTTCAAGTAACTTTCTTGGAGAAGGAGGGTTTGGACATGTGCATAAGGGGTTCATTGATGACAAGCTTAGACCTGGTCTTGAGGCTCAGCCAGTGGCTGTCAAACTCTTGGATTTAGATGGCACTCAGGGTTGTCATGGTTTAATTTATGTGATGGTAAGTTTTTAA 399 0.4261 MKFSWKSIFPSCYKGEYSSPMPTKVVATMASSLNMISVTDLSFPSATTLSEDLSVSLAGSNLHVFTLAELKIITQTFSSSNFLGEGGFGHVHKGFIDDKLRPGLEAQPVAVKLLDLDGTQGCHGLIYVMVSF. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03355 132 Gene3D Phosphorylase Kinase; domain 1 47 127 - -
Seca2g03355 132 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
Seca2g03355 132 SUPERFAMILY Protein kinase-like (PK-like) 52 119 IPR011009 -
Seca2g03355 132 PANTHER OS01G0588500 PROTEIN-RELATED 56 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03355 Seca-Chr2 102749617 102750015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03355 59 121 Trihelix Transcription Factor Family AT1G26150 44.444 4.18e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03355 - - gmx:100783759 193.356