Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03345 ATGGCTCTCTCAGACTCTTCTTCTCCTCGCCGTAACACTCTGATCCCTTCCTTCCTCTATGGCTCTTCCCCTAAAACCCTACCTCTCCACCAGATCCTCAACTCCTCCGCCGCCCCCGCCGCCACTCAGCCATCTTCCGTCTCCGGCGGATCTCGCGGCAGCGGCCTCATGATTCCGGCTCCCAAAGAGTCTGGCAAGATCGAGATGTATTCACCGGCCTTCTACGCCGCCTGCACTGCTGGTGGAATCCTCAGTTGTGGTCTAACTCACATGGCCGTCACTCCTCTTGACCTCGTCAAGTGTAACATGCAGATTGACCCTACTAAGTACAAGAGCATCTCGTCTGGGTTTGGAGTTTTGCTCAAGGAGCAGGGTGTGAAGGGATTTTTCCGCGGCTGGGTGCCTACCTTGCTCGGTTACAGTGCACAGGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCTAGCAAGTACAAGACTTTAATCTACCTTGCTGGTTCAGCTTCTGCGGAGGTTATTGCTGATGTTGCACTCTGCCCCTTTGAAGCTGTCAAGGTCCGTGTCCAAACTCAGCCTGGTTTCGCAAGAGGACTTGCTGATGGACTCCCAAAATTTGTCAAATCTGAAGGAACCTTAGGGCTGTACAAGGGATTGGTGCCTTTGTGGGGACGTCAGATTCCATACACGATGATGAAGTTTGCTTCTTTTGAGACCATTGTTGAGCTGATCTATAAGCATGCCATCCCTACACCAAAGAATGAGTGCAGCAAAAATCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATGTAGCTGGTGTATTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGTGAGTGTCAGACTTGGTGTATATTTTTTGTTATTGTTTCGTATTTGTTTGTGTTTGACAAGTTTCTTTGATGTTATCAACCGTATAATGCAGGCGGTGAAGAAGCTTGGCTTGTGGGGTCTCTTTACACGTGGTCTCCCTCTCCGTATTGTTATGATCGGAACACTCACTGGAGCCCAGTGGGGAATATACGATGCATTCAAAGTCTTCGTGGGGCTGCCAACCACTGGTGGTCCAGCTCCTGCCGCTCCTCCTGCCACCGCACCTGCGGAACTTGCAAAGGCATAG 1221 0.4947 MALSDSSSPRRNTLIPSFLYGSSPKTLPLHQILNSSAAPAATQPSSVSGGSRGSGLMIPAPKESGKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPTKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKNLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDVSVRLGVYFLLLFRICLCLTSFFDVINRIMQAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPPATAPAELAKA. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03345 406 Gene3D Mitochondrial carrier domain 73 379 IPR023395 -
Seca2g03345 406 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 57 392 IPR044677 GO:0005315|GO:1990547
Seca2g03345 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Seca2g03345 406 FunFam Phosphate carrier protein, mitochondrial 59 164 - -
Seca2g03345 406 SUPERFAMILY Mitochondrial carrier 76 377 IPR023395 -
Seca2g03345 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Seca2g03345 406 Pfam Mitochondrial carrier protein 76 159 IPR018108 -
Seca2g03345 406 Pfam Mitochondrial carrier protein 172 258 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03345 Seca-Chr2 102413399 102417690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03345 11 406 Chloroplast and Mitochondria Gene Families AT5G14040 73.892 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03345 K15102 - gmx:548006 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05012 10 115386855 115390613 Seca2g03345 2 102413399 102417690 PCT