Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03336 ATGGACAGGGCTTCAATCCTTGGAGATGCAATTGAGTATCTGAAGGAACTCCTACAAAGGATCAATGACCTTCATAACGAGTTGGAATCAACACCTGTTGGCTCTTCACTCACACCTGCCTCAAGCTTCCATCCTTTGACACCTACTCCACCACCACTACCTAACCGTATTAAAGAAGAACTATGCCCCGGCTCATTGCCAAGCCCCAATTGCCAACCTGCTAGGGTAAATGCTGGAACCTTGTCCTTTTGCTCAGATATTTGCTCAAATCGACATTGCTTCCTTACTTTCTATTCCTTTAACTAG 306 0.451 MDRASILGDAIEYLKELLQRINDLHNELESTPVGSSLTPASSFHPLTPTPPPLPNRIKEELCPGSLPSPNCQPARVNAGTLSFCSDICSNRHCFLTFYSFN. 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03336 101 Coils Coil 7 31 - -
Seca2g03336 101 MobiDBLite consensus disorder prediction 32 58 - -
Seca2g03336 101 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 36 IPR036638 GO:0046983
Seca2g03336 101 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03336 Seca-Chr2 102060281 102060586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03336 1 76 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 78.947 7.03e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03336 - - gmx:100217341 129.413