Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03317 ATGCACTCTGTTTTCTTCGCTTCACTTGCGCTGAGCGCAAGTGAAGCACAGATTTGCAAAAGTGCCTATGTTTTCTGCGCTTCACTTGCGTTGAGCACAAGTAAAGCGCAGGAGCACGCTACAGTTATAACTGTAACGCTCGCTCCACCTGCGCTGAGCGCAGATGGAGCGCAGCTGCGCCTCCAAGATTCTTATTCTTCGAATTTCGATTTCCTCTTCAAGATGGTATGCACCAAGATAACCACAGTCGCTAGTTCGTCAGGGCTCCGAAAAAGAAGGAGGAGAGATGTTAGTCCTTCATTGGATTATGGCAAGTTCATATGGAATTTGAACTTTGTAGTTGGTTTTGACTCTAACATACATTGCAATAGTCATGGAGAAATATGTCATCGAGATTTGAAGTTGGAGAACACTTTATTGGAAGGCAAATGTCTTAAAATTAGTGATTTCGGCTACTCTAAGCACTGTTCTTGGTTCGCTTTTTTTACACTTTCAAGTAAGATGAAGCTTGTCAAAAGAAAAGAAGCGATTGATGCCTTTCGTAGGTTTTATGGCATTATTCTCCTAATCCTGACAACCTCCAGCACTGATCTATTGGTTTCCTTGTGA 609 0.4253 MHSVFFASLALSASEAQICKSAYVFCASLALSTSKAQEHATVITVTLAPPALSADGAQLRLQDSYSSNFDFLFKMVCTKITTVASSSGLRKRRRRDVSPSLDYGKFIWNLNFVVGFDSNIHCNSHGEICHRDLKLENTLLEGKCLKISDFGYSKHCSWFAFFTLSSKMKLVKRKEAIDAFRRFYGIILLILTTSSTDLLVSL. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03317 202 Gene3D Transferase(Phosphotransferase) domain 1 118 174 - -
Seca2g03317 202 SUPERFAMILY Protein kinase-like (PK-like) 125 161 IPR011009 -
Seca2g03317 202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03317 Seca-Chr2 101508889 101510759 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Seca2g03317 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03317 K14498 - ming:122064061 52.373