Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03307 GTGTATTCATATTTGGTTTTATTCACTATCCCGTTTGAGCAGGTGTGTGACAGTGAAGATTATAACATCAGCTGTATATTTGAAGAAGCGTGTAATTTTATAGATCATGTTGAACAAACAGGTCAGAAAGTTTTAGGTCATTGCTTTGAAGGGAGGAGCAGAAGTGCTACGTTGGTCCTTGCTTACTTAATGCTCAGGAAGAAGTACACTTTATTAGAAGCATGGCAAGCTCTGAAACGAGTTCACCGTCGAGCACAGCCCAATGATGGTTTTGCAAAGATCTTACAGAAACTGGATCAGAAACTACATGGGAAGGTTTCAATGGAGTGGCAGCAACCGAAACCAACTATGAAAGTTTGCCCTATCTGTGGCAAAAACGCTGGACTAAGCAGCAGCTCACTTAAGTTGCATCTGCAGAAATCACATAGAAAGCTATCATCTGGGAGTGTAGATAGTGCCATGACAATGGAAATCCAGAAGGCATTAACAGCTTTGAAGATTAGCCGTGGTCGTAGTGTCAGCCCCACACAAAGGTCGTCTCATTCAATAATAGATCAAAAGAAACTGCAAATTCGACCAAAAAAAAAAAGAAACTGCAAATTCTTTTATTTTACTTTATCAAATGTCAGCAGGTTAGAGATTGAGATAAAAATTTAG 657 0.3942 VYSYLVLFTIPFEQVCDSEDYNISCIFEEACNFIDHVEQTGQKVLGHCFEGRSRSATLVLAYLMLRKKYTLLEAWQALKRVHRRAQPNDGFAKILQKLDQKLHGKVSMEWQQPKPTMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGRSVSPTQRSSHSIIDQKKLQIRPKKKRNCKFFYFTLSNVSRLEIEIKI. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03307 218 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 28 80 IPR000387 GO:0016311|GO:0016791
Seca2g03307 218 SMART dsp_5 1 101 IPR020422 GO:0006470|GO:0008138
Seca2g03307 218 Gene3D Protein tyrosine phosphatase superfamily 4 125 IPR029021 -
Seca2g03307 218 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 104 IPR020422 GO:0006470|GO:0008138
Seca2g03307 218 Pfam Dual specificity phosphatase, catalytic domain 15 98 IPR000340 GO:0008138|GO:0016311
Seca2g03307 218 CDD DSP 17 97 - -
Seca2g03307 218 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 7 185 IPR035010 GO:0004721|GO:0009737|GO:0043622
Seca2g03307 218 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 104 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03307 Seca-Chr2 101304712 101305626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03307 4 171 Protein tyrosine phosphatase (PTP) family AT5G23720 75.000 1.85e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03307 K14165 K17614 gmx:100799468 295.049