Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03303 ATGGCTCCCTCTGACCAATCATGCCACTCTCTCATCCCTGGATTCCTATACTCATCAAAAACACTCTCCCATTTGGATACTTCCATCAACTCCAATCATGGATTGCCACCTGCACCCACCACCTCCTCCATTGTATCATCATCACCACAGGGTAGGACTAGAAGTACTCCTATGATCCCTGCACCAAAGGAGGGTATCCGCATGTTTTCTCCTGCTTACTACGCTGCATGCAGTGCCGGTGGCGTCTTCAGCTGTGGCCTTACCCACATGGCTGTCACTCCCCTTGATCTAGTCAAGTGCAACATGCAGATTGATCCGGTAAAGTATAAGAATATCACATCAGGATTTGGAGTTTTAATGAAGGAGCAGGGGGCTAAAGGTTTCTTCAGGGGTTGGGTGCCTACTTTGCTTGGCTACAGTGCTCAAGGAGCGTGCAAGTTTGGGTTTTATGAGTTCTTCAAGAAGTATTACTCAGATCTTGCAGGACCTGAGAATGCAGTCAAGTACAAAACTTTTATCTATCTAGCTGGTTCTGCTTCAGCTGAAGTTATTGCTGATATTGCCCTTTGTCCCATGGAGGCAGTCAAAGTTCGTGTACAAACTCAACCTGGGTTTGCTAGAGGTTTGTCAGATGGGTTACCCAAGTTTATCAAGGCTGAGGGTGCTGCTGGGTTGTATAAAGGACTTGTTCCTCTTTGGGGCCGTCAAATTCCATACACGATGATGAAATTTGCTTCCTTTGAGACTGTTGTGGAGATGATCTACAAATATGCCATCCCAGCCCCTAAAGAACAGTGCAGCAAAAATTTGCAGCTTGGAGTCAGTTTTGCAGCAGGATATATTGCAGGTGTACTGTGTGCAATTGTCTCACACCCTGCTGACAACCTCGTTTCTTTTCTCAACAATGCTAAAGGAGCCACTGTTGGTGATGCTGTGAAGAAGATTGGTTTAATGGGTCTCTTCACTCGTGGCCTTCCTCTTCGTATTGTTATGATTGGAACACTAACTGGAGCACAGTGGGGACTATATGATTCATTTAAAGTATCTGTAGGGCTGCCTACAACTGGTGGAAGTGCTCCTGCACCTACAAAATAG 1095 0.4594 MAPSDQSCHSLIPGFLYSSKTLSHLDTSINSNHGLPPAPTTSSIVSSSPQGRTRSTPMIPAPKEGIRMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLMKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTFIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGAAGLYKGLVPLWGRQIPYTMMKFASFETVVEMIYKYAIPAPKEQCSKNLQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLMGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVSVGLPTTGGSAPAPTK. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03303 364 SUPERFAMILY Mitochondrial carrier 73 344 IPR023395 -
Seca2g03303 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 270 349 IPR018108 -
Seca2g03303 364 MobiDBLite consensus disorder prediction 28 55 - -
Seca2g03303 364 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 56 360 IPR044677 GO:0005315|GO:1990547
Seca2g03303 364 Pfam Mitochondrial carrier protein 171 257 IPR018108 -
Seca2g03303 364 Pfam Mitochondrial carrier protein 75 158 IPR018108 -
Seca2g03303 364 Gene3D Mitochondrial carrier domain 73 348 IPR023395 -
Seca2g03303 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 253 IPR018108 -
Seca2g03303 364 FunFam Phosphate carrier protein, mitochondrial 72 350 - -
Seca2g03303 364 MobiDBLite consensus disorder prediction 28 60 - -
Seca2g03303 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03303 Seca-Chr2 101211841 101214760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03303 9 362 Chloroplast and Mitochondria Gene Families AT5G14040 77.285 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03303 K15102 - gmx:100800530 640.958