Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03278 ATGGAGAAAAACCTTGCTCAAAATTCCGGCAGTTTCGCTCGCAGAGACGAGCACAACAACAACAACGCCGGCGAAACGCCGCGTTCTTCCATGCCTGACTCTACACAAACGGATCCCAAACCTAACGTCGGCGACACCGCCGAAGCGGAACCTCCGCTTCCGCCGACGCCTCAAGGAGATCAGATCGACGAGGAGAAGAAAGAAGAGGCCGTGACGTCTCCTCCACCTAGCCTCGAGAAGGTTTCAGAAGACATTGATCAATGGCTTGTGACTCTGCAGCGGAAGGATGACAAAAACGAGAAAGGAGGGTCGTTTGAGATCCCTGGCTTCGTGGAGAGATTCTTGGATCTGGTGGAGGAAAAGATAGCGAAGTATGACATGGGCGAAGGCAAAGGCAAATGGGGAGAGGTGGTGGAGGAAGATTCTTGGTTGTTGGAAACTGTGGATCGGATTTCGAAAGTGATGAAGTCGTTGAGTTCTCATCAAACCTCAGAAGAGATCAACGGTGGAAAAAGAGACTCGCTGGTGAACCGTATTGGCTCCATTCAACAGCGTGCGATGTCGTATTTGGAGGAGGACTTTCGGTGGTTAATGGAAGAATCTAGAAGCCCAACCGAATTAGATCCCGGCGGGAACAATAATAATAACAACCAGAAAGACGATCCCAAAGGGAAGCACGTGGCATCAGAACAACCGGAATTCGAAACGAATTTCCCGGGTTACCCGGAGGAGGCCATTACCAGCCTGAGCAAGATCGCTGGCGAGATGTTATCCGCCGGCTACGAATCGGAGTGCTGCCAGATTTACATCATGGCAAGGAGGAACGCGTTCGAGGAGATCCAGCAGAAGCTAGGGTTGGAGAGGATCAGCATCGACGAGATGATCCAGAAGGTGCAGTGGGAGACCCTAGCGAGAGACATGATCCCTGCCTGGATCAACACGTTCCGGCAATGCGCCGCCGTTTACTTCCCCGGCGAGAGGAAACTGGCGGAGGCGGTGTTCTCAGGGAATCCGTCCGTCGCGGCAGGGCTCTTCAGCAGCCTCTCTCGCGGCGTGGTGATACAGCTCCTCAACTTCGCGGAGGGCGCCGCCCTGACGAAGCGCGCTGGCGAGAAGCTCTTCAAGCTCCTTGACATGTACGAGACGCTCCGCGACGTTATCCCCAAACTAGACGGTTTCTTCCCTGAAGAGTCCGTGGAAGAGGTGAAGACGGAGATGAACGTCGCCAAGTCGCGGCTTGCCGAGGCCGCGATCTCAATCTTCTGCGATCTGGAAAACTCAATAAAATCCGAAACCGCCAAAACTCCGGTCCCCGGCGGCGCTGTTCACCCTCTCACACGCTACATCATGAACTACCTCAACATAGCAGGGGATTACAAGGAGACGCTAGAGCAGGTTTTCAAGGAGCACTCCAAGATTGAGCGCGCAGATTCCACTAGCAGGCCTCACCATGAAAACGACGTCGTTGCGGAGAAAGAGACTTCGTCGCCGTTCGCTGCACAGGTGATGAGGGTGATGGAGTTGCTTGACTCGAGCCTGGATGGGAAGGCGAGGCTATACCGTGACGTGGCGCTGAGCAACTTCTTCATGATGAACAATGGGAGGTACATTCTACAGAAGATCAAGGGTTCCTCAGAGATGAGCCAGGTGATGGGTGACACGTGGTGCAAAAAGAGATCCACAGAGCTGAGAAACTACCACAAGAACTACATGAGGGAGACATGGAATCGGGTCCTTTCGTGCCTAAACCTGGAAGGGTTGAGCGTGAATGGGAAGGTGCAAAAGCCAGTGCTGAAGGAGAGGTTCAAGAGCTTCAATGCGCTGTTTGACGAGATTCACAGGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGATATCGGCGGTGATTATTCCGGCGTACAGGTGCTTCCTTGGTAGGTTTGCGCAGTATTTGGATCCGGGGAGACAGACGGAGAAGTATATAAAGTACCAGCCAGACGATATAGAGACTTACGTTGAGGAGTTGTTTGATGGGAAGCCTCACCAGTCTATTGCTAGAAGAAAAACATAA 2076 0.5313 MEKNLAQNSGSFARRDEHNNNNAGETPRSSMPDSTQTDPKPNVGDTAEAEPPLPPTPQGDQIDEEKKEEAVTSPPPSLEKVSEDIDQWLVTLQRKDDKNEKGGSFEIPGFVERFLDLVEEKIAKYDMGEGKGKWGEVVEEDSWLLETVDRISKVMKSLSSHQTSEEINGGKRDSLVNRIGSIQQRAMSYLEEDFRWLMEESRSPTELDPGGNNNNNNQKDDPKGKHVASEQPEFETNFPGYPEEAITSLSKIAGEMLSAGYESECCQIYIMARRNAFEEIQQKLGLERISIDEMIQKVQWETLARDMIPAWINTFRQCAAVYFPGERKLAEAVFSGNPSVAAGLFSSLSRGVVIQLLNFAEGAALTKRAGEKLFKLLDMYETLRDVIPKLDGFFPEESVEEVKTEMNVAKSRLAEAAISIFCDLENSIKSETAKTPVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFKEHSKIERADSTSRPHHENDVVAEKETSSPFAAQVMRVMELLDSSLDGKARLYRDVALSNFFMMNNGRYILQKIKGSSEMSQVMGDTWCKKRSTELRNYHKNYMRETWNRVLSCLNLEGLSVNGKVQKPVLKERFKSFNALFDEIHRTQSSWVVKDEQLQSELRVSISAVIIPAYRCFLGRFAQYLDPGRQTEKYIKYQPDDIETYVEELFDGKPHQSIARRKT. 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03278 691 Gene3D Exocyst complex component Exo70 135 688 - -
Seca2g03278 691 MobiDBLite consensus disorder prediction 1 85 - -
Seca2g03278 691 MobiDBLite consensus disorder prediction 1 42 - -
Seca2g03278 691 MobiDBLite consensus disorder prediction 473 493 - -
Seca2g03278 691 FunFam Exocyst subunit Exo70 family protein 129 686 - -
Seca2g03278 691 MobiDBLite consensus disorder prediction 201 240 - -
Seca2g03278 691 SUPERFAMILY Cullin repeat-like 145 679 IPR016159 -
Seca2g03278 691 MobiDBLite consensus disorder prediction 473 491 - -
Seca2g03278 691 Pfam Exo70 exocyst complex subunit 310 675 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca2g03278 691 PANTHER EXOCYST COMPLEX PROTEIN EXO70 115 680 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03278 Seca-Chr2 100418396 100420528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03278 57 691 EXO70 exocyst subunit family AT5G13990 50.835 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03278 K07195 - gmx:100820172 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03278 2 100418396 100420528 Seca10g05005 10 115303068 115305197 PCT