Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03262 ATGATCAATTCAATGTGTGGAAGCTCAGTGTCCCTGAAGAGTGAGAACTCTAGAACCAAATTTCAACCCACTTCTTCAAATGACTCAGTTTTGCAGTCTAAGAAAAATGCCACTCAATCCTCTGCTCATTTAGAGCAAACTAGTCTAACCCCACCAAGCTTAAACCTTCCTGAACTCAAATTTGACTTGGATGGAGATGTGGAAGTCCAATCACCAGACAGTTCAATGTGGGAGTCTTTTTTCTCTGATCATTTAGATGCTGATTTCATGATCTCTTCCCCCGTGAGGAACGTTCCTTCCCCACAAGCTTCTACCTACAACTGCAACTATAACTATGCTCAGGGAATGCAAGGTCAGAGTCTTTCAGGGTGTTCACCACCACGTTTTACATCCCAAATTGGAGCCTTTAACAGCAGCCACAAAGGGAAAGGACTTAGCCCACTTCACAGGGTGTTTAACTCACCAAACAACCAGTACATGCAGCATATTGAAAATCTTTCACTGCCAGCAATAGAAGAGTTCTTGGAGGACTATCAAGGAGATGAGTTAGGTGGTGGAGGATATTCATCAAACAAGTTGTCTTCTGATATTGGAAACTCATCTGAATGCTTTGACATGCAAACTCCAATTCCATCCATCTTGGACAGCTTGAATATGCCCAATTCCTCAAGGTACTGTGAATCAGTTAGTGAAGAATCCTCAGTGCATGGTGGTTCCTCTCAACCGTCCGAAGAGAGTGACATCTATCACCATATGGGGTCCATGGCTAGTGCATCCCTCTCTCAAGCTCTCCAACAAGAACGTTACCATGAGAAACAGCAAAAGCAGCAGACACAACAACTGCAACAACAAAGCTTGACAGTGCCTATTCCAATCGGAATTGACCAGGAGCAAGACAGTGGCCTCCAACTGGTGCACCTTCTTCTAGCTTGTGCTGAAGCAGTAGCCAAAGAAGAATACATGCTAGCAAGAAGGTACCTGCACCATCTGAACAGGGTAGTGTCACCACTAGGCGACTCCATGCAGCGCGTCGCTTCATGCTTCACAGAATCACTAAGCGCAAGACTCGCCGCAACACTCACCACCACCAAGCCACCAACAACAACCTCCAACACAACCAAATCACCACCACAACCACCACCACCATCATCATGTCTCTCACCCTTCCCATCAAACTCCATAGAAGTCCTCAAGATCTACCAAATCGTCTACCAAGCCTGTCCATACATCAAATTCGCCCACTTCACCGCCAATCAGGCCATCTTCGAAGCCTTCGAGACCGAAGAGCGCGTCCACATCATCGATCTTGACATCCTCCAGGGCTACCAGTGGCCAGCTTTCATGCAAGCCCTCGCCGCACGTCCCGGCGGCGCTCCGTTCCTCCGAATAACCGGCGTCGGCCCCTGCATCGAATCCGTTAGAGAAACCGGACGATGCTTAACAGAATTAGCACACTCGCTTCGAATCCCCTTCGAATTCCACCCTGTAGGGGAACAATTGGAGGATCTGAAACCGCACATGTTTAACCGTCGCGTTGGAGAGGCCTTGGCGGTTAACACCGTTAACCGTCTCCACCGAGTTCCCGGTAACCACCTTGGGAGCTTGCTTTCAATGATAAGGGACCAAGCACCTAACATAGTGACACTTGTGGAGCAAGAGGCGAGCCACAACGGGCCTTATTTTCTTGGAAGGTTTCTCGAGGCGCTGCATTATTACTCGGCGATTTTTGATTCGTTGGATGCGACGTTTCCACCGGATTCGGCGCAGAGGGCGAAGGTGGAGCAGTATATATTCGCGCCGGAAATAAGGAACATTGTGGCGTGTGAGGGGCCTGAGAGGATAGAGAGGCATGAGAGGTTGGAGAAATGGAGGAAGATCATGGAAGGGAAAGGATTCAAAGGTGTGACGCTGAGTCCTAACGCGGTGACTCAGTCGAGGATATTGCTGGGTTTGTATTCGTGTGATGGGTATCGGTTGACAGAGGATAAAGGCTGCTTGTTGCTTGGGTGGCAGGATAGAGCCATAATAGCTGCATCTGCGTGGCGCTGCTGA 2052 0.4888 MINSMCGSSVSLKSENSRTKFQPTSSNDSVLQSKKNATQSSAHLEQTSLTPPSLNLPELKFDLDGDVEVQSPDSSMWESFFSDHLDADFMISSPVRNVPSPQASTYNCNYNYAQGMQGQSLSGCSPPRFTSQIGAFNSSHKGKGLSPLHRVFNSPNNQYMQHIENLSLPAIEEFLEDYQGDELGGGGYSSNKLSSDIGNSSECFDMQTPIPSILDSLNMPNSSRYCESVSEESSVHGGSSQPSEESDIYHHMGSMASASLSQALQQERYHEKQQKQQTQQLQQQSLTVPIPIGIDQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVSPLGDSMQRVASCFTESLSARLAATLTTTKPPTTTSNTTKSPPQPPPPSSCLSPFPSNSIEVLKIYQIVYQACPYIKFAHFTANQAIFEAFETEERVHIIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGSLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAPEIRNIVACEGPERIERHERLEKWRKIMEGKGFKGVTLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC. 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03262 683 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 254 677 IPR005202 -
Seca2g03262 683 MobiDBLite consensus disorder prediction 1 54 - -
Seca2g03262 683 MobiDBLite consensus disorder prediction 260 280 - -
Seca2g03262 683 MobiDBLite consensus disorder prediction 360 385 - -
Seca2g03262 683 MobiDBLite consensus disorder prediction 224 247 - -
Seca2g03262 683 ProSiteProfiles GRAS family profile. 295 682 IPR005202 -
Seca2g03262 683 MobiDBLite consensus disorder prediction 1 57 - -
Seca2g03262 683 Pfam GRAS domain family 304 682 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03262 Seca-Chr2 99331014 99335547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03262 298 683 GRAS Transcription Factor Family AT1G66350 44.133 2.97e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca2g03262 GRAS 1.3e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03262 - - gmx:100775374 1023.85