Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03258 ATGGAAAAGTTAAATGAAAATGGTTTCCAACTTAGTGTGAAGCTAAGTGAACCAACTCTAGTTGCTCCTGCAGAAGAAACAAAGAAAGGCATGTACTTCCTATCTAACCTTGACCAGAACATTGCTGTTATTGTTAGAACTGTTTATTGCTTCAAAACGGCTGAGAAAGGAAATGAAAAGGCTGTAGAAGTGATCAAGAATGCCTTGAAGAAGGTTCTTGTTCACTATTACCCTCTTGCTGGGAGATTGAGTATAAGCTCAGAGGGTAAACTCATAGTAGACTGCACAGGGGAGGGTGCCCTGTTTGTGGAGGCTGAGGCAAACTGTTCAATGGAAGAGATTGGTGACATCACAAAGCCACACCCAGGGACTCTTGGTAAGCTGGTTTATGACATTCCTGGAGCAAAGCACATCCTTCAGATGCCTCCTTTGGTTGCCCAGGTAGTGACCAAGTTTAAATGTGGAGGCTTTGCTCTTGGGTTGTGCATGAATCATTGTATGTTTGATGGCATTGGTGCTATGGAGTTTGTGAACTCTTGGGGTGAAGTAGCCAGAGGCCTACCACTCTCTATTCCTCCAATTCTAGACAGAAGCATACTCAAGGCTCGCAACCCACCTAAGATAGAGCATTTGCACCAAGAATTTGCTGATATTAAAGACAAGTCCAGCACTAATAGCTTGTATGAAGATGAGATGGTCTACAGGTCCTTCTGTTTCGATCCTGAGAAGCTAAAGCAACTGAAGATGAAAGCTATGGAAGATGGGGCTCTTGAATCTTGCACAACTTTTGAAGTTCTCTCAGCATTTGTATGGATAGCTCGAACCAAAGCACTAAAAATGTTGCCAGATCAGGAAACAAAGCTCCTTTTTGCTGTTGATGGAAGGGCTAAGTTTAACCCTCCTCTTCCAAAAGGGTACTGTGGAAATGGGATTGTGCTAACAAATTCTGTATGTCAAGCAGGTGAATTAACAGATAAGCCCTTCTCATATGCTGTGAGGCTCATTCAAGATGCAATCAAAATGGTCACAGACAGTTACATGAGATCAGCTATAGATTATTTTGAGGTGACAAGAGCTAGGCCTTCTTTAGCTTGCACCCTTTTGATCACAACTTGGTCTAGGCTGTCCTTCCATACCACTGATTTTGGATGGGGAGAACCTGTTCTTTCAGGGCCAGTGTCACTGCCAGAGAAGGAAGTGATTTTGTTCCTTTCTCATGGCCAAGAGAGGAGAAACATCAATGTGCTTCTGGGTTTGCCAGCTCCTGTCATGAAGATCTTCCAGGATTTGATGCAGATATAG 1302 0.4332 MEKLNENGFQLSVKLSEPTLVAPAEETKKGMYFLSNLDQNIAVIVRTVYCFKTAEKGNEKAVEVIKNALKKVLVHYYPLAGRLSISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPHPGTLGKLVYDIPGAKHILQMPPLVAQVVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEVARGLPLSIPPILDRSILKARNPPKIEHLHQEFADIKDKSSTNSLYEDEMVYRSFCFDPEKLKQLKMKAMEDGALESCTTFEVLSAFVWIARTKALKMLPDQETKLLFAVDGRAKFNPPLPKGYCGNGIVLTNSVCQAGELTDKPFSYAVRLIQDAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPAPVMKIFQDLMQI. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03258 433 FunFam Spermidine hydroxycinnamoyl transferase 11 215 - -
Seca2g03258 433 Gene3D - 8 214 IPR023213 -
Seca2g03258 433 Coils Coil 427 433 - -
Seca2g03258 433 FunFam Tryptamine hydroxycinnamoyl transferase 219 432 - -
Seca2g03258 433 Gene3D - 215 432 IPR023213 -
Seca2g03258 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 428 - -
Seca2g03258 433 Pfam Transferase family 12 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03258 Seca-Chr2 98864840 98867465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03258 11 431 Monolignol Biosynthesis Gene Families AT5G48930 34.873 1.07e-83 261