Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03244 ATGGATCCCAAGGGCTCAAAGCAGCCACCGCAGGCACAGGATGTACCCAACTTCCTGAGCCTCCCGCAGCCACAACAACAAGAAGGGAACAACAACAACAACATGGGAGAGAACAAGCCAGCAGAGGTGAAGGATTTCCAGATTGTGATCGCTGAGAAAGATGAGAGCAAGAAGCAGTTAGCACCAAAGAGGAGTTCCAACAAGGATAGGCACACAAAGGTTGAAGGTAGGGGAAGGAGGATAAGGATGCCAGCTCTATGTGCAGCTAGAATCTTTCAGTTGACCAGAGAATTGGGTCACAAATCTGATGGGGAAACCATCCAGTGGCTTCTTCAGCAGGCTGAGCCATCTATAATAGCAGCTACTGGGACTGGGACAATTCCAGCATCTGCTTTGGCTGCTGCTGGTAACTCTGTTTCACAACAGGGGACCTCTTTATCTGCTGGGTTGCACCAAAAAATTGATGAATTGGGAGGGTCCAATATTGGGTCAGGGAGTAGGACCAGCTGGGCAATGGTTGGAGGAAATTTAGGGAGACCCCATGTGGCCACTGGTTTATGGCCCCATGCCACTGGATTTGGATTTCAGTCATCATCTGGTCCATCTACAGCTAGTTTGGCCACTGATGGTTCAAATTACCTGCAAAAGATTGGGTTCCCTGGGTTTGACTTGCCTGCCACCAACATGGGTCCTATGAGTTTCACTTCAATTTTGGGTGGTGCTGGGGGTAACCAGCAGATTCCTGGTTTGGAGCTGGGGTTGTCTCAAGATGGACATATTGGGGTCTTGAATCCACAAGCCTTGAGCCAGATTTATCAGCAGATGGGTCAAGGTAGAGTACACCAGCAGCAGCAGCAGCAGCCTCCTACTAAGGATGATTCTCAAGTACTCAAGTCTCCAGATACAGGTGGAATTGCAGGGCCAGATAGGTTGGCTGCTTTGGTCTGGCCTTAA 954 0.4969 MDPKGSKQPPQAQDVPNFLSLPQPQQQEGNNNNNMGENKPAEVKDFQIVIAEKDESKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSVSQQGTSLSAGLHQKIDELGGSNIGSGSRTSWAMVGGNLGRPHVATGLWPHATGFGFQSSSGPSTASLATDGSNYLQKIGFPGFDLPATNMGPMSFTSILGGAGGNQQIPGLELGLSQDGHIGVLNPQALSQIYQQMGQGRVHQQQQQQPPTKDDSQVLKSPDTGGIAGPDRLAALVWP. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03244 317 MobiDBLite consensus disorder prediction 10 38 - -
Seca2g03244 317 MobiDBLite consensus disorder prediction 275 309 - -
Seca2g03244 317 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 197 IPR005333 GO:0003700
Seca2g03244 317 MobiDBLite consensus disorder prediction 275 297 - -
Seca2g03244 317 Pfam TCP family transcription factor 66 151 IPR017887 -
Seca2g03244 317 MobiDBLite consensus disorder prediction 1 77 - -
Seca2g03244 317 MobiDBLite consensus disorder prediction 46 77 - -
Seca2g03244 317 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03244 Seca-Chr2 98410365 98411773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03244 1 272 TCP Transcription Factor Family AT3G27010 56.401 9.81e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Seca2g03244 TCP 3.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03244 - - cave:132180810 459.529