Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03210 ATGGGTATGTTTCAGGAGAAACTTGTGTCTTTCTACAAGAGCAGATGGCTTGTCTTTGTGGCTGCAATGTGGTTGCAATCATGGGCAGGTATTGGATACTTGTTTGGAAGCATATCACCTGTTATAAAGAGTTCCCTTAACTATAACCAGAAGCAGCTTTCCATGTTGGGTGTGGCTAAGGACCTTGGTGATTGTGTTGGGTTCATCACTGGGGTGTTATGTGAGATTTTGCCTATCTGGGGTGCTCTCCTTGTTGGGGCTACTTTGAACCTTGTTGGGTATGGTTGGGTGTGGTTGATCGTCACTGGTCGAGTTGCAGCTCTTCCTTTATGGGCTATGTGTGTTCTTATATTTGTGGGAACAAATGGCGAAACCTACTTCAACACAGTTTCTTTGGTCTCTTGTGTGCAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTTGGAATTCTAAAGGGATTTTGTGGGTTGGGTGGTGCAATCTTGACACAAATATATGCAGTTATCCATTCCCCTGATCATGCATCATTGATATTCATGGTTGCTGTAGGTCCAGCATTGGTAGCAATAGGTCTTATGTTCTTTGTTAGACCTGTTGGAGGTCACAAACAAGTGCGGCCATCAGATGGAAAATGCTTCACATTTGTCTATGGTGTGTGCCTTCTATTAGCTGCTTATTTGATGGGAGTAATGGTTGTCCAAGATTTGGTTGATGTGAGCGAAACTGTTATCACAGTGTTCACAGCTATCCTCATTTTGATCCTCTTTGTCCCCATTGTAATCCCTATCTCATTGACTTTCGGCCCCGAGCAAAAGGCTCCAGAGGAAGAGGCATTTCTTCCAGAACCACAGAATAAAGATACAGGAAAATCTCAAGTGGATTCTGATGAAGTAATATTAAGTGAGGTGGAAGATGAGAAGCCTAAGGAAGTGGACTTGCTTCCTGCATCAGAGAGGCAGAAACGTATAGCTCAATTACAATCAAGACTACTCCAAGCAGCAGCAGAAGGAGCAGTGAGGGTTAAGAGAAGAAGAGGACCACATAGAGGGGAGGACTTTACCTTGACACAAGCTTTGATTAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGGTCTTGGGTTCTGGATCCGGATTGACTGTAATTGACAATCTGGGTCAGATGAGCCAGTCTCTAGGATATGACAATGCTCATATATTTGTCTCCATGATCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGCGGTTACATATCTGAGGTTGTTGTAAGGGATCATGTCTATCCAAGACCAATTGCATTGGCTGTGTTTCAAGTTGTTATGACTCTTGGCCATGTTTTCATTGGTATGGGATGGCCAGGTGCAATGTATATTGGAACTTTACTTGTTGGACTTGGTTATGGGGCTCACTGGGCAGTTGTTCCAGCTACTGCCTCTGAGTTGTTTGGTTTGAGAAACTTTGGTGCATTGTACAATTTCATCACACTGGCAAACCCTGTAGGAACTCTTGTCTTCTCTAGTCTCATAGCCAGTAGAATCTATGATTATGAAGCAGAGAAACAAGCTCATGGTGGCCTTCACCAGAATATAGGATCACTTGTGTCGCGTGTGCTTAATGTTGGTCAGCCATTACAGTGTGAAGGTTCTGTATGCTTTTTTCTAACTTCCATTATCATGGCAGCATTATGCATTGTTGCAGCAGGCTTGTGTATGGTTCTTGTATTCAGAACTAAGACTGTTTATGCCAACCTATATGGAAAATCTTCTACTAATAGGCTTCGATAA 1782 0.4321 MGMFQEKLVSFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLNYNQKQLSMLGVAKDLGDCVGFITGVLCEILPIWGALLVGATLNLVGYGWVWLIVTGRVAALPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFCGLGGAILTQIYAVIHSPDHASLIFMVAVGPALVAIGLMFFVRPVGGHKQVRPSDGKCFTFVYGVCLLLAAYLMGVMVVQDLVDVSETVITVFTAILILILFVPIVIPISLTFGPEQKAPEEEAFLPEPQNKDTGKSQVDSDEVILSEVEDEKPKEVDLLPASERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISEVVVRDHVYPRPIALAVFQVVMTLGHVFIGMGWPGAMYIGTLLVGLGYGAHWAVVPATASELFGLRNFGALYNFITLANPVGTLVFSSLIASRIYDYEAEKQAHGGLHQNIGSLVSRVLNVGQPLQCEGSVCFFLTSIIMAALCIVAAGLCMVLVFRTKTVYANLYGKSSTNRLR. 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03210 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 581 - -
Seca2g03210 593 SUPERFAMILY MFS general substrate transporter 9 201 IPR036259 -
Seca2g03210 593 Pfam Nodulin-like 15 262 IPR010658 -
Seca2g03210 593 Gene3D MFS general substrate transporter like domains 355 580 IPR036259 -
Seca2g03210 593 SUPERFAMILY MFS general substrate transporter 212 577 IPR036259 -
Seca2g03210 593 Coils Coil 315 335 - -
Seca2g03210 593 CDD MFS_Mch1p_like 14 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03210 Seca-Chr2 97217509 97222261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03210 5 589 Nodulin-like Gene Family AT5G14120 71.429 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03210 - - aprc:113861924 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03210 2 97217509 97222261 Seca2g03210 2 97217509 97222261 ECH