Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03204 ATGGAGATGGCAAGGATAGTATTAGTGGCTGTGATTATGGGTTTTACGATGATATCAAATGGAGAAGGGCAATTAGTAGAGAATTTCTACAGTTCAACTTGTCCTAATGTAGAATCCATCGTGACCCAAGCAGTGACCACCAAGTTTGCACAGACCATCACAACAGGACAAGCCACTCTGCGTTTATTTTTCCATGACTGCTTTGTTGAGGGTTGTGATGCCTCTGTTATGATCTCGTCGCCAAATGGGGACGCAGAGAAAGATGCATCAGAAAATCTTTCCCTAGCAGGAGATGGGTTTGACACAGTGATAAAAGCAAAGCAAGCAGTGGAAGCTTCATGCCCTGGTGTAGTCTCATGCGCAGACATTTTAGCACTCGCCACCAGAGACGTTATAGTCTTGCTTGGAGGTCCATCATTCAACGTGGAACTTGGGCGTCGAGACGGGCTTATTTCTCTGGCATCAAGGGTAGAAGGAAACCTTCCCAAAGCAAATTTCAATCTCAATCAACTAATCGACATGTTCTCCAAACACGGCCTAACCCAAACTGACTTGATTGCCCTCTCCGGAGCCCACACCGTTGGGTTCTCACACTGCGACCAATTCGCAAACCGTTTATACTCATTTTCATCAACGTCTCCAGTGGACCCCACTAAAATCACCAGGGTTGTTTGCAAACCCAATCACCGTAGCCTGTGA 699 0.4635 MEMARIVLVAVIMGFTMISNGEGQLVENFYSSTCPNVESIVTQAVTTKFAQTITTGQATLRLFFHDCFVEGCDASVMISSPNGDAEKDASENLSLAGDGFDTVIKAKQAVEASCPGVVSCADILALATRDVIVLLGGPSFNVELGRRDGLISLASRVEGNLPKANFNLNQLIDMFSKHGLTQTDLIALSGAHTVGFSHCDQFANRLYSFSSTSPVDPTKITRVVCKPNHRSL. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03204 232 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 FunFam Peroxidase 28 173 - -
Seca2g03204 232 Pfam Peroxidase 42 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Seca2g03204 232 Gene3D - 28 161 - -
Seca2g03204 232 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Seca2g03204 232 Gene3D Peroxidase, domain 2 162 219 - -
Seca2g03204 232 CDD secretory_peroxidase 24 218 IPR033905 GO:0004601|GO:0042744
Seca2g03204 232 SUPERFAMILY Heme-dependent peroxidases 24 218 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 ProSiteProfiles Plant heme peroxidase family profile. 24 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g03204 232 PANTHER - 3 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03204 Seca-Chr2 97052480 97055228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03204 15 218 Peroxidase AT5G14130 69.118 1.45e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03204 K00430 - gmx:100791275 371.318