Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03197 ATGGAGCAAAATGAATGTCAACCACTTGAAATTGATGAGGCTAAAGATATTTTTCTAGGTCAAGTTGTGTATAACAAAGATGAAGCTTATAACTTGTACCAAGAACATGTATTCAAAATAGGTTTTAGTGTAAGAAGAGGGAGGGAGTTATATTATGATATTGAGAAAAAGAACATTCGTTTGAAGGATTTTTATTGCTCCAAAGAAGGGTTTAAGAACAATGAACCTGTAGGTGAAGTGACTCATGAAAGAACAGATTCAAGAACAAATTGCAAAGCTATGGTGAGATTTAATGTAAGGATGGGGTATGGGGACGAGGTTGGTGGGTTTGATAATCTTGGTATGACGATGAAAGATATGTATAATTATGTCTACTCTGAAAAGTTGAAATTAATTGATGCTGGAGATGCTCAGGCTTTGGTGAATCACTTACAAAGTAGACAAGCACAAGATTCAATGTTCTACTATAGTGTGCAGTTAGACCAGAACTCACGTCTGACTAATTTATTTTGGAGGGATGGAAAATCTAAAGTTGATTATGATTGCTTTGGAGATGTTATGGTTTTTTACACCACTTATCGTACTAATAAATATAACATGATTTGTGCCCCCTTTGTTGGTGTAAATCATCATTGGCAAAATGTTATGTTTGGTTGTGCCTTGTTATTTGATGAAACTGCAGTTTCTTTCACTTGGTTGTTCAAAGTGTTTTTGGAAAGTATGGGAAACCAACAACCAAAAACAATCTTTACAGATCAAGATGCAACTATGGCCAAAGCAATTGGAGAGGTAATGCCGGATACATGTCATCGATTATGTTTGTGGCATATAGTTAAAAATGCTCCTTCTCATTTGGGTTCTCTCAATTCTGACCATAAGTTTCAAAGCTTATTCATAATGCATGAAAGGTTGTGA 915 0.3508 MEQNECQPLEIDEAKDIFLGQVVYNKDEAYNLYQEHVFKIGFSVRRGRELYYDIEKKNIRLKDFYCSKEGFKNNEPVGEVTHERTDSRTNCKAMVRFNVRMGYGDEVGGFDNLGMTMKDMYNYVYSEKLKLIDAGDAQALVNHLQSRQAQDSMFYYSVQLDQNSRLTNLFWRDGKSKVDYDCFGDVMVFYTTYRTNKYNMICAPFVGVNHHWQNVMFGCALLFDETAVSFTWLFKVFLESMGNQQPKTIFTDQDATMAKAIGEVMPDTCHRLCLWHIVKNAPSHLGSLNSDHKFQSLFIMHERL. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03197 304 Pfam FAR1 DNA-binding domain 32 99 IPR004330 -
Seca2g03197 304 Pfam MULE transposase domain 187 280 IPR018289 -
Seca2g03197 304 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 287 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03197 Seca-Chr2 96956328 96957403 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03197 MULE 6.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03197 - - tpra:123905334 472.241