Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03149 ATGCATACATTGATTCGTGACCGAGACATATCAAAGCATGATTTTGTATTTTATTCTGATCGACTTATTCGACTGGTTGTTGAGCATGGTCTAGGTCATCTGCCTTTCACTGAAAAGCAAGTGGTTACTCCAACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAGAAATTATGCGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGCGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCACCGGGATGGAGACTATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGGCATGTTTTGCTTCTTGACCCCGTCCTTGCTACAGGTAACTCTGCCAACCAAGCAATTGAATTACTCATTCAGAAAGGAGTACCAGAATCCCACATTATATTTCTGAATCTCATTTCTGCTCCTGAGGGAATCCATTGTGTGTGTAAAAGGTTCCCATCATTGAAAATTGTCACATCTGAGATTGATGTTGCATTAAATGAAGAGTTTCGTGTTATCCCGGGATTGGGTGAGTTTGGTGATCGCTACTTTGGCACAGATGATTGA 594 0.404 MHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDYGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03149 197 SUPERFAMILY PRTase-like 1 194 IPR029057 -
Seca2g03149 197 CDD PRTases_typeI 53 168 IPR000836 -
Seca2g03149 197 Pfam Uracil phosphoribosyltransferase 1 195 - -
Seca2g03149 197 FunFam Uridine kinase 1 195 - -
Seca2g03149 197 Gene3D - 1 195 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03149 Seca-Chr2 94558840 94564571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03149 1 197 PRT Gene Family AT5G40870 93.909 9.22e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03149 K00876 - zju:125424257 386.341