Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03108 ATGAAAGTGAAGTACAGGAATGGTGTGGAGGATCCTTTTCACACTGCTGGAATCATTGTTGCAAGCTCTGGCTGGTGTGTTCTGCATAATGCTGGGCCTTCAAATCCTGCATTGGAGTTATGTTGGCATGTTGCAGTAGCTACTATGGATGAATTAATTAAGATGGCCCAGCCAGATAGCCCTCTTTGGATTAGGAATTCAGATGGCAGCAGGGAAGTGCTGAACCATGAGGACACAGTGTTAACTGAACTGTGTGTCTTTGTCTTTGTTCACAACATGGCCACCGCTTCAGTGGCATTCAAGTCGAAGGAGGATCATCACAAACAGATTGAGTTGGAGGAAGCCCGTAAAGTCGGGCTTGCGCCTGCTGAGGTGGATGAAGATGGGAAGGAAATCAACCCCCACATTCCCCAGTATCTGTCATCTGCACCTTGGTATCTTCGAGACCTTTGTGGAGCTATGACACATGATGCCAAGCCATGCATGGAACGACCACGAAAAGTGGGAGCAAAGTGGACAAACAAGCACATTGCCCTTGATGAAAAGATTGAAACTTTTGAGCTTGACTATGATGGAAAACGGGACAGGTGGATTGGGTATGATGCATCAACTTATGCTCGAGTCAATGAGAGGTATGAAGCTAGAGATGAAGCTCGAAAGAAGTACTTAAAGGAACAACAACTGAAGAAATTGGAGAAAAGCAACCAAAATGGTGAGGGTGCTGCAAGTGATGAGGATGAAGATGAAGATGATCTAAGGGTAGATGAAGCAAAGGTTGATGAGAGCAAACAAATGAACTTTGCAAAGGTTGAAAAGTGGGTCCGTACAACAGGCGGTGGGGGTACAGGAACTGTGAGGTCCATGCGTGAAGATCCTCTCCCAGATGCAGATCCAAATGAAAAGTTTTATGAGGGTGATAACCAATATAGAAATAGTGGTCAAGCTTTGGAATTCAAGGAATTTGTTGAGAATATTCTAAATTTCTGTAGATAA 993 0.4441 MKVKYRNGVEDPFHTAGIIVASSGWCVLHNAGPSNPALELCWHVAVATMDELIKMAQPDSPLWIRNSDGSREVLNHEDTVLTELCVFVFVHNMATASVAFKSKEDHHKQIELEEARKVGLAPAEVDEDGKEINPHIPQYLSSAPWYLRDLCGAMTHDAKPCMERPRKVGAKWTNKHIALDEKIETFELDYDGKRDRWIGYDASTYARVNERYEARDEARKKYLKEQQLKKLEKSNQNGEGAASDEDEDEDDLRVDEAKVDESKQMNFAKVEKWVRTTGGGGTGTVRSMREDPLPDADPNEKFYEGDNQYRNSGQALEFKEFVENILNFCR. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03108 330 MobiDBLite consensus disorder prediction 278 299 - -
Seca2g03108 330 PANTHER STEP II SPLICING FACTOR SLU7 98 148 IPR039974 GO:0000398|GO:0030628
Seca2g03108 330 MobiDBLite consensus disorder prediction 227 252 - -
Seca2g03108 330 Pfam Pre-mRNA splicing Prp18-interacting factor 188 272 IPR021715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03108 Seca-Chr2 93193463 93197231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03108 44 78 Homeobox Transcription Factor Family AT3G61150 60.000 9.47e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03108 K12819 - gmx:100797503 354.755