Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03097 ATGGAACAAACTGAGGATAACAATACTGGTGCGGAGGATCCAAATAAATCTAAATATCCCAGTGATCAGAATTTGGATTCTGATAAGATTCCTGAAGGTTACAAAAAGATAAGTGAACTAACAGATGAGGATATTAGAGGGCTTGAGTTTGATTCTAAAGAGGATGCATATCTTTTCTATCGTGAGTATGCTAAATTTGTAGGGTTTGCTGTTAGGAAACATGATGTGTATAGGGACCATAATGATGTAATTACTATGAGGCAATTGGTATGTAACAGAGAAGGTGAGAGAAGTGAGAAGCATCTTAATAGGTCTGATAGAATTAGGGAGGCAAAGCCATTGACAAGAACTAATTGTAATGCAAGAATCCGTGTTTCTTTAGATTATAAGAGTAGGAAGTGGAGGGTTGTAATGTTTGAGCCGACTCACAACAATGAATTGACTCCTACAAGTATGATACATCTTTTATCGACATATCGTGGTTTAAGTGTAGCTGATAAGGCTCAGGTTGATGGTCTTCATGTTTATGGTGTTAGAACTTGCCATATTATGGGTTTGATAATGGGACAGAAAGGAGGTTATTCTGATCTTGGATTCTGTAAGAAGGATTTGTACAACCATGTTGATAAAGAGAATAGGGCAAAAATAGAGGATTTTAAATCTTTAATTTATGGGAATTTTACTCATGAGAAATTTGAGGATGAATGGAAGAGGGTTGTTGATACCCATGGTTTGAGAGAAAATAGGTGGATTAGAAAAGTATATGATTTGAAGAGGATGTGGGTCACTGCATATCTAAGGGAAAAAATTTTTGGGGGGATTAGGACAACTTCTATATGTGAAGGAATTAACTCTTTCATTAAGAGGTATGTTCAGAGCAAAAATAGCCTTGTTGACTTTCTACACAATTTTGAGAGAGCACTCAATGAGTACAGACACAATGAGTTAACTTCAGATTTCAAATCTACTTATACTCAACCTGTGATGACAACTGCATTGGAAAAGTATGAATTTCAAGCTTCTAATGTCTACACAAGGAATAAGTTTTTTGATGTTCGGAATCAAATTGAGAAAGTTCCTGCCATAAATGTAATTGATAGGTCAGATGTTGGTAATGTGGTTACAATGAAGTTGAATAAATTTGGAAGTCCTGATTCTGAGTATATTGTTAAGCTGGATAAGTGTACTGGTAAGTTGGTTTGTAATTGTCGCATGTTTGAATCCTGTGGCATACCTTGTTCACACATTTTTAGTGCTATGAAGCACGAGCAAATTGATAAAATACCTGAATCTTTGATTTGCAAAAGATGGACAAAGTTGGCTAAAGTTGAGCACATTTCTGCGGTTTATGTTGAAGAAGGGGACACTTCAAAGAAGAATTTATTAAGGTCTAGTGCTATTGGTGTTGCATGTAATAGGCTTAATAAGGCCGCTCGTAAAAATCCTCACAATTTTGTAAAAAACATTGTATGTATTCATAAGTTGGATGAACAGATGGAAAGGCAGGAAGGTATTGATCTGAACACTGCTGATATATCAAGAGTTGTCCGTGATCCTACTGTTGTTAAAACTAAAGGTGCCCCTCGAAAGAATAAGAAAATGACCAAAAAAAGGAAATGTTCCTTTTGTAAACATGCAGGACACACTGTTAGGACATGCACTAAATATGCTACTCGTGATCAATTGGACACCCTTATTGAAGAGGAATCGTCTATTGAGACTGATGAAGATTCAAGGGATGAAAGTGTAAGGTTACTGGTCTTCTTTGATTTTGATAAATATTGTTATCCTCTTTATTTGTATTTATCTTTAACACATGTTACAATTTTTTATTATTGCAGAGGTCACGAGGTGTTAATTTCTCCAAGCATGTGA 1875 0.3552 MEQTEDNNTGAEDPNKSKYPSDQNLDSDKIPEGYKKISELTDEDIRGLEFDSKEDAYLFYREYAKFVGFAVRKHDVYRDHNDVITMRQLVCNREGERSEKHLNRSDRIREAKPLTRTNCNARIRVSLDYKSRKWRVVMFEPTHNNELTPTSMIHLLSTYRGLSVADKAQVDGLHVYGVRTCHIMGLIMGQKGGYSDLGFCKKDLYNHVDKENRAKIEDFKSLIYGNFTHEKFEDEWKRVVDTHGLRENRWIRKVYDLKRMWVTAYLREKIFGGIRTTSICEGINSFIKRYVQSKNSLVDFLHNFERALNEYRHNELTSDFKSTYTQPVMTTALEKYEFQASNVYTRNKFFDVRNQIEKVPAINVIDRSDVGNVVTMKLNKFGSPDSEYIVKLDKCTGKLVCNCRMFESCGIPCSHIFSAMKHEQIDKIPESLICKRWTKLAKVEHISAVYVEEGDTSKKNLLRSSAIGVACNRLNKAARKNPHNFVKNIVCIHKLDEQMERQEGIDLNTADISRVVRDPTVVKTKGAPRKNKKMTKKRKCSFCKHAGHTVRTCTKYATRDQLDTLIEEESSIETDEDSRDESVRLLVFFDFDKYCYPLYLYLSLTHVTIFYYCRGHEVLISPSM. 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03097 624 PANTHER OS01G0519700 PROTEIN 215 551 - -
Seca2g03097 624 MobiDBLite consensus disorder prediction 1 33 - -
Seca2g03097 624 ProSiteProfiles Zinc finger SWIM-type profile. 388 424 IPR007527 GO:0008270
Seca2g03097 624 SMART 26again6 399 426 IPR006564 GO:0008270
Seca2g03097 624 Pfam FAR1 DNA-binding domain 59 148 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03097 Seca-Chr2 92830733 92833088 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03097 FAR1 8.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03097 - - aip:107640898 343.969