Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03072 ATGGATTTTAATAGTGATGATTCAACTGTTAATCTGGATGATGATAGGGACGTAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGAGTAGTGAGGCTGATATGGATGAGGAGAATGATGTTATGGATACAGATGTTAGAGACGATGTGTCAAGGAGGATAATTGACTTGACAAGTGATGATATAAGGGCTTTGGAGTTCTCTAGCGAAGAACATGCGTTCAATTTTTACTTTTCTTATGCAAAATGTAAAGGATTTGCTATGAGGAAGGATGATGTACTTCGAGACAGAAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTATGAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACACAGACCTCTTACCCGTACCAATTGTCAAGCTAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACCTCTAATTCGTAATTATCGGGATTGA 537 0.3818 MDFNSDDSTVNLDDDRDVSYSDSSSSHEMSSEADMDEENDVMDTDVRDDVSRRIIDLTSDDIRALEFSSEEHAFNFYFSYAKCKGFAMRKDDVLRDRKGMVIMRQYLCSRAGMRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVPLIRNYRD. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03072 178 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 167 - -
Seca2g03072 178 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Seca2g03072 178 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03072 Seca-Chr2 92345071 92345652 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03072 FAR1 2.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03072 - - ccaj:109794460 175.637