Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03070 ATGGCTTTTGTGGTAAGACAGCCTCAAAGTTGCCTCCGCGAAGCAGAAATAATTGATTTTGTAGCCAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTAGCATTTATCGATTCCATACCAAAGAATGCAGCAGGGAAAATACTGAGGAAGGACTTAAATAAAATTGTTCTCGGACGATCATGCTCTAGGTTATAA 198 0.399 MAFVVRQPQSCLREAEIIDFVAKQVAPYKKIRRVAFIDSIPKNAAGKILRKDLNKIVLGRSCSRL. 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03070 65 SUPERFAMILY Acetyl-CoA synthetase-like 1 59 - -
Seca2g03070 65 Pfam AMP-binding enzyme C-terminal domain 1 47 IPR025110 -
Seca2g03070 65 Gene3D - 1 59 IPR045851 -
Seca2g03070 65 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03070 Seca-Chr2 92250983 92251435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03070 1 65 Monolignol Biosynthesis Gene Families AT5G63380 67.692 7.33e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03070 K01904 - lja:Lj1g3v3833570.1 107.071