Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03069 ATGGAGGACAAGGCCAGAATCTGCACGGTGGATCCAAAGAGCGGTTTCAACTCCGCTTCCAGAACCTTCCACAGCCTCAGGCCTCCACTAAACCTTCCTCCACCAGACGCCACCATCTCCGCCGCGGCCTACACCCTCTCCCTCCGCCACAACTCGACCTGGTCAGACTCAGTTATTGCCCTCATCGACTCAGCCACGTGTCACCAACTCTCCTACTCCGACTTCATCCACTGTTCACAAACCTTAGCCACCAACCTAACCACTCTCCACGGACTCACCAAAGGCCACACCGCATTCATCCTCTCCCCAAACCTCATCCAAGTTCCGATCCTCTACTTCGCGCTACTCTCCATTGGCGTGGTCCTCTCCCCCGCAAACCCAACCTCCACGCGCTCCGAGATTTCGCACCTCCTCAAACTCTCCCAACCTGTTATCGCCTTTACGACGTCGTTTTCCGCGAACAAACTCCCAAGCCTCCCTCTTGGAACAATTCTCCTCGATTCGCCCGAGTTCGACTCGCTCTTGAAGACCGCGAGTTCCATACCGCCGCCGAACGCGGAGGTTAGTCAATCCGACGTGGCGGCGGTTCTGTACTCGTCGGGGACCACGGGGAAGTCGAAAGGAGTGATCCTCACGCACCGTAACTTGACGGCGATGGTGGCGATATGCGACACCGTTCGCGTGCAGACGGAGAGACCTGCGGTGTACCTGCATATGGCGCCGTATTTTCACGTTTACGGTTTTACGAGTATTTTGAGGTCGGTGGCTATGATGGACACCGTGGTGGTGATGGAGAGGTTTGGTTTGGGGAAGATGCTAGGGGCGGTGGAGAAGTTCCGGTTGACTCACGTGGTGACGGCGCCGCCGGTAGTGGTGGCGATGAGCAGAGAAGGAATGACGGAGGGGTATGATTTGACGTCGTTGAAGGTCGTCATTTGTGGTGGTGCTCCGCTTGGGAATCACAACGCCACGGTTTTTAAATCCAAGTTACCTGGAGTACTGCTCAGCCAGGGATATGGGTTAACTGAATCAACAGCCGGAGCTATCCGAACAACAGGTCCGGAGGAGGCTAACCGGGCAGGAACAACAGGTAGGCTGGTATCTGGGATGGAAGCAAAAATAGTGAACCCCAACACAGGAGAGGCCATGTTTCCTGGTGAACAAGGGGAACTCTGGATTAGAGGACCTACAATTATGAAAGGGTATGTTGGTGACCCAGAGGCAACTTCTGTTACATTGCAGGACGGGTGGCTCAGGACAGGGGATCTTTGCTATTTCGACAATGAGGGTTTCATGTATGTTGTGGACAGGTTGAAAGAATTGATCAAATACAAGGGCTACCAGGTAAACTTATCTGATTCTATTGCCCTTCCATCCAACTCATGCATGATATATTGTCAACTGCTAGGTTAG 1413 0.5372 MEDKARICTVDPKSGFNSASRTFHSLRPPLNLPPPDATISAAAYTLSLRHNSTWSDSVIALIDSATCHQLSYSDFIHCSQTLATNLTTLHGLTKGHTAFILSPNLIQVPILYFALLSIGVVLSPANPTSTRSEISHLLKLSQPVIAFTTSFSANKLPSLPLGTILLDSPEFDSLLKTASSIPPPNAEVSQSDVAAVLYSSGTTGKSKGVILTHRNLTAMVAICDTVRVQTERPAVYLHMAPYFHVYGFTSILRSVAMMDTVVVMERFGLGKMLGAVEKFRLTHVVTAPPVVVAMSREGMTEGYDLTSLKVVICGGAPLGNHNATVFKSKLPGVLLSQGYGLTESTAGAIRTTGPEEANRAGTTGRLVSGMEAKIVNPNTGEAMFPGEQGELWIRGPTIMKGYVGDPEATSVTLQDGWLRTGDLCYFDNEGFMYVVDRLKELIKYKGYQVNLSDSIALPSNSCMIYCQLLG. 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03069 470 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Seca2g03069 470 Gene3D - 33 440 IPR042099 -
Seca2g03069 470 SUPERFAMILY Acetyl-CoA synthetase-like 56 451 - -
Seca2g03069 470 Pfam AMP-binding enzyme 58 444 IPR000873 -
Seca2g03069 470 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03069 Seca-Chr2 92234620 92239722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03069 10 449 Monolignol Biosynthesis Gene Families AT5G63380 48.578 1.34e-145 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03069 K01904 - gmx:100801143 555.829