Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03059 ATGAGCATAGGTTCTGTGCTTGATTTGGGTTTACTAATGGGTAAGCATCAGAAGATAGCAATGGAAATTGCAGTTCAAGAGTTCAATCGCTTGAGCTGTTCCAAGCTGAATTTAAAAATAAAAGATTCCTGTGGGAATTCGGCTCAAGCAATTGCTAGTGGTAACAGCGACCGAGTGGTGGCCATCATAGGAACAATAACTCACAATGAAGCGACTCTGGCAAGTGAATTCAATGACAACATGAAGAAGATTCCTATCTTGTCTCTAACTTCACCAGCTGTTAGAGAAGAGTTATTATCTCCTCAATTGCCACACTTCATTCAAGTAGGCGAAGATATCGGGTTTCACATGCAATGCAATGCAGCAATTGTAGGAGAATTCAGATGGCAAAAGGTGACAGCAATCTATGAACTTAGTAACAGGTTTACCTCTGATCCAGGAATATTGTTTGGCCTCTCCTATTCTCTTCGACTTGTTGGCTCTGAGATTGAAAACTATTTAGCTTTGCCTTCCTTATCCACTCTGTCAGACCCAAAATCAATTATTGAAAATAAGCTTAGTAAGTTGAAGAGGAATAGTAATAGGGTCTTCTTGATTGTGAAATCTTCTCTAGAGCTGGCTAATTTGGTTTTTGAGAAAGCAAAGCAAATAGGTTTGATGGAAAAAGGTTCTGTGTGGGTTATCCCAGATAGGGTTGCTGGCCTTCTTGAAACTGTTAATTCTTCTGTTATCTTTAACATGCAAGGTGTTGTGGGATTTAAAACACACTTCATGGAAATGAGTGACACATTTAGAAAGTTCAAATTCAAATTTCGAAGAAGGTTTGCATTAGAATACCCTGAAGAAGAGAACATTAACCCAAGCAGCTTTGCACGCCGAGCATATGATGCAACTTGGACTATTGCTCAGGCTGCAAATAAATCACATGGAAAGTTCAGCTTAGAAGAATTCGCAGAAAAGATTCCTTCTAGTAAATTTGGCAGACTAAGTAGAAATACTAGCTCCAAGAATGATAAATTACTGCAATCACCAACCTTTAACATAATTAATACATCATCCAATAATGGTTCTACTGGAGTTTATTGGCCTGGAGACTCATCCAATAATGAGGAAAGGACATTGAAAATAGGAGTGCCTGCCAAAGGTGCCTTTACTCAGTTTGTGAATGTGACATATGATCAGAGCAGGAATGAAACTTCCTTCTCTGGTTTCTCAATCAGTGTCTTCAAAGCAACTGTTAAACGTTTGCCTTATGAGTTGATTTACATGTTTGTTCCCTTCAATGGCTCTTATGATGAAATGGTTGATCAAGTCTACAATAAGACATTGGATGCTGCTGTCGGAGACACATCAATAATGGCATATAGATATCATTTAGTTGACTTCTCACAACCTTATGTTGAATCTGGCCTTGACATGGTGGTTACTGAGCAACCAGCAAAATTAAAAGAAACATGGATGTTTTTGGATGCCTTTACCAAAGAAATGTGGTTGATGATGGTAGCTATGCACATTATTGTGGGATTTGTCATTTGGTTGATTGAAAGGGAGGCTAATGCAGAATTAAAGGGATTGGGGTCCATGCTTTGGTTTTTGGTCACTGTAATATTCTATGCACCCAGAGAACCAATAAGAAGACCCTTGGCTCGAACTGTACTAGCACCATGGTTATTTGTTATCCTCATTGTAACAAGTAGTTTCACAGCAAGTTTGACATCCATGATGACTATTTCACAAGTAATCGATTACCCTACTGCATTTAAGAACAAGGATATAGAAACCGCTTTCTTTGTTGCACCTCATGCTAAAGTCTTTCTAGCAAAGTACTCATGCAAGGGCTTCATCAAAGCAGGGAGAAGTTTCAGGCTTGGTGGCTTTGGTTTTGTGGGTTTCTCTCCTCTCATTATCACTGTTTTAAGACATGTATTTCCAAAAGGTTCCACTCTAGCTGTTGACATATCTGAGGCATTGCTGAATGTGATAGAGAGCGGAGAAACAGAACAACTAGAAAAAGATATGCTGAATATGATAAAGAGTGCAGGGAATGCAAGTTGCTATCCTTTAGAGGGCAAGGAAAAAGACAAGTCATCCATAGGATTTCAACCTTTCCTTGGACTATTTTGCATCTCTTCTACTGTTGCTATTGTGGCATTTTTATATTTTATGTTCTGTTTTTTCATGAAGAAGGTAATAGAATCAACATTAACACAATTATAG 2217 0.3848 MSIGSVLDLGLLMGKHQKIAMEIAVQEFNRLSCSKLNLKIKDSCGNSAQAIASGNSDRVVAIIGTITHNEATLASEFNDNMKKIPILSLTSPAVREELLSPQLPHFIQVGEDIGFHMQCNAAIVGEFRWQKVTAIYELSNRFTSDPGILFGLSYSLRLVGSEIENYLALPSLSTLSDPKSIIENKLSKLKRNSNRVFLIVKSSLELANLVFEKAKQIGLMEKGSVWVIPDRVAGLLETVNSSVIFNMQGVVGFKTHFMEMSDTFRKFKFKFRRRFALEYPEEENINPSSFARRAYDATWTIAQAANKSHGKFSLEEFAEKIPSSKFGRLSRNTSSKNDKLLQSPTFNIINTSSNNGSTGVYWPGDSSNNEERTLKIGVPAKGAFTQFVNVTYDQSRNETSFSGFSISVFKATVKRLPYELIYMFVPFNGSYDEMVDQVYNKTLDAAVGDTSIMAYRYHLVDFSQPYVESGLDMVVTEQPAKLKETWMFLDAFTKEMWLMMVAMHIIVGFVIWLIEREANAELKGLGSMLWFLVTVIFYAPREPIRRPLARTVLAPWLFVILIVTSSFTASLTSMMTISQVIDYPTAFKNKDIETAFFVAPHAKVFLAKYSCKGFIKAGRSFRLGGFGFVGFSPLIITVLRHVFPKGSTLAVDISEALLNVIESGETEQLEKDMLNMIKSAGNASCYPLEGKEKDKSSIGFQPFLGLFCISSTVAIVAFLYFMFCFFMKKVIESTLTQL. 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03059 738 FunFam Glutamate receptor 116 285 - -
Seca2g03059 738 Gene3D - 487 604 - -
Seca2g03059 738 Pfam Receptor family ligand binding region 18 324 IPR001828 -
Seca2g03059 738 Pfam Bacterial extracellular solute-binding proteins, family 3 398 483 IPR001638 -
Seca2g03059 738 SUPERFAMILY Periplasmic binding protein-like II 369 671 - -
Seca2g03059 738 Pfam Ligand-gated ion channel 494 710 IPR001320 GO:0015276|GO:0016020
Seca2g03059 738 SUPERFAMILY Periplasmic binding protein-like I 3 355 IPR028082 -
Seca2g03059 738 CDD GluR_Plant 372 674 - -
Seca2g03059 738 Gene3D - 352 486 - -
Seca2g03059 738 SMART GluR_14 373 676 IPR001320 GO:0015276|GO:0016020
Seca2g03059 738 Gene3D - 117 288 - -
Seca2g03059 738 FunFam Glutamate receptor 369 484 - -
Seca2g03059 738 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 582 729 IPR015683 -
Seca2g03059 738 Gene3D - 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03059 Seca-Chr2 91969237 91973148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03059 1 726 Ion Channels AT2G29120 28.014 9.88e-80 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03059 - - gmx:100778941 944.11