Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03047 ATGGAATTCGAGTCACAGGAAAATGCTCATTTATTCTACATGTACTGTGCTAAACGGATTGGATTTGGTGTGTCAATTAAGACTAGTCGCCGTTCAAAAATTGATAGACAATTTATTGATGTAAAGTATGCTTGCACAAGATATGGGAAAAAGCGAGAATCCACTGCTCGTAATCCACGCCCTTGTTTGAAGGTGGAGTGTGAGGCTAGCTTACGGATTAAAAGAAGTTGTGGTGGAAAATGGGTTGTCCATGACTTCATCAAAGACCATAATCATGAGCTTTTTCCATCATATGCACACTATTTTCCTTGCCATAGAGGCATCAATCAAGCTCAAAAGCATTGTAGAGTAAGAACAAGCAAAATTTATGCTATAATGGACAAACAATATGGAGGTTATGAAAACATTGGCTGCTTAGAGAAAGATATTAGAAATCATTTGGATAAGGATCGTCGTTTGGCTTTAGAATCAGGAGATGCAAATGCAATGTTGGAGTGTTTTATGCTTATGCAAGAAGAAAATCCAAGATTTTTTTATGCAATTGATTTAGATGATGAAGGTCGTGTGAAAAATATATTTTGGGTGGATGCAAAAGGTAGAGATGACTATAAAGAGTTTGGAGATGTAATTTCCTTTGATACAACATATATCGCAAATAATTATAAAATGCCATTTGCTCCTTTCATTGGTATGAACAACCACTTCCAGTCAAGGCTACTTGGTTGTGCATTACTAGCAGATGAGTCTTCAAAAACTTTCTCATGGTTGATGAAAACGTGGCTTAGAGCTATGGGTGGAAAGCCTCCAAATGCAATAATAACTGATCAAGATAGAGCAATGAAAGTAGCTATTCAAGAGGTGTTTCCAAATGCTCGACATCGATTTTCTCTTTGGCACATACTAAGAAATGTACCTAAAAAGCTTAGCCATGTATTCAGAAAACATGAAGATTTCATGACCTATCTCAACAAATGCATTTACAAGTCTTGGTCAAAGCAGCAATTTGAAGATAAATGGCAAGAAATGGTCGAGAAATTTCAGTTGGTGGAGGATGAATGGATTCAGTCTTTATATGAAGAACGTGAACATTGGATTCCTGTTTACATGAAAGATACATTTTTTGGTGGCATGTCAACAACTCAAAGATCAGAGAGCATCAACTCATTTTTCGATAAATATGTAAGCAAGAAAACTACATTGAAGGAATTTGTTGAAAAATATAAAGTTGCTTTACAAGATAGAGAAAAAGTGGAAATGCAAGCTGATTTTAATACATGGCACAAGCAACCTATTCTTAAGACTCCATCACCTTTTGAGAAGCAAATGTCAATGATTTATACATATGAAGTCTTCAAGAAATTCCAATTTGAAGTTTTAGGATTGTCTGGATGTCATCTTGTAGAAAAGAATGAAGATGGTCAGTTTTCTCTTTTAAAATTATGGACTTTCAAAGAAATGAAGACTTTTTTGTAG 1473 0.351 MEFESQENAHLFYMYCAKRIGFGVSIKTSRRSKIDRQFIDVKYACTRYGKKRESTARNPRPCLKVECEASLRIKRSCGGKWVVHDFIKDHNHELFPSYAHYFPCHRGINQAQKHCRVRTSKIYAIMDKQYGGYENIGCLEKDIRNHLDKDRRLALESGDANAMLECFMLMQEENPRFFYAIDLDDEGRVKNIFWVDAKGRDDYKEFGDVISFDTTYIANNYKMPFAPFIGMNNHFQSRLLGCALLADESSKTFSWLMKTWLRAMGGKPPNAIITDQDRAMKVAIQEVFPNARHRFSLWHILRNVPKKLSHVFRKHEDFMTYLNKCIYKSWSKQQFEDKWQEMVEKFQLVEDEWIQSLYEEREHWIPVYMKDTFFGGMSTTQRSESINSFFDKYVSKKTTLKEFVEKYKVALQDREKVEMQADFNTWHKQPILKTPSPFEKQMSMIYTYEVFKKFQFEVLGLSGCHLVEKNEDGQFSLLKLWTFKEMKTFL. 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03047 490 Pfam MULE transposase domain 209 303 IPR018289 -
Seca2g03047 490 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 473 IPR031052 GO:0006355
Seca2g03047 490 Pfam FAR1 DNA-binding domain 12 96 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03047 Seca-Chr2 91350547 91352040 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g03047 MULE 8.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03047 - - tpra:123886760 844.343