Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g03040 ATGCCAAGTGTGGCTGTGAAGCTCTATAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTTTGCAGAATCGGATTCAAGCTCCACCCGAAAACTCAGACCCGTTTGGTGTTACCTCACGACCCGAAGAATCTGTCGCCGCAGCCAATCCTTCCTTCACCGACGGCGTTGCCACCAAGGACATCCACATCGACCCTTTCACCTCCCTCTCTATCCGAATCTTCCTTCCTGAATCTGCACTATCCCCACCCGAACCTCATTCCAAACATCACCCACCACCTCCCAAGCCTAGGTCCAACCCTATCCACTCGAAGCCTGATCCCGAACCTGGATCTGCTCGCCTCGATTCGATTTCGCGGCGCAACAGCTATGGCCCCCATTACCGGGAAGAGCCCCGAGGGAACAGCTTCGGAGCCAGCAACAGCGTCGAGGGTTTGAATTTGATGTCCGGCGCCGGCGCCGGCGCCGGCGGTGGAGGTTACCGCGGATACTCGCCGGCGCTGAACAATCGCCGGAGGAAACTGCCTGTGATGCTGCAGTTTCACGGCGGTGGTTGGGTTAGCGGGAGCAACGATTCCGTAGCCAATGACACCTTCTGCCGGCGGATCGTGAAGCTCTGCGACGTGATCGTGGTCGCTGTCGGTTACCGGCTGGCGCCGGAGAGTCGGTACCCGGCGGCGTTTGAGGATGGGCTGAAGGTGTTGAATTGGCTTGCGAAGCAGGCGAATTTGGCTGAGTGTAGCAAGTCCATGGGGACTGGAAGGGTCGGAGGACATGGTGGTAGTGAGTTTAACAAATCAGATGCTCATAGGCATATTATTGATTCCTTTGGAGCTTCAGTGGTTGAGCCGTGGTTGGCTACTCATGGAGATCCATCAAGATGTGTTCTTCTTGGAGTAAGTTGTGGTGCAAATATTGCAGACTATGTGGCCCGAAAAGCTGTGGAAGGAGGAAAACTTCTGGACCCTGTCAAGGTGGTAGCACAGGTGCTAATGTATCCATTTTTTGTTGGAAGTGTTCCCACACATTCTGAAATAAAGTTGGCAAACTCCTACTTTTATGACAAGGCCATGTGTATGCTTGCATGGAAACTTTTCCTACCTGAGGAAGAATTTAGTTTGGACCATCCAGCTGCTAACCCCCTTGTCCCAGGCCGGTCTCCTCCTTTAAAGCTGATGCCTCCAACAATGACAGTGGTGGCAGAACATGACTGGATGAGGGATCGTGCCATTGCTTACTCAGAGGAGCTCCGGAAGGTGAATGTTGATGCACCTGTTCTTGAGTATAAGGATGCAGTACATGAATTTGCAACACTAGACGTACTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCCATATGGGTCAAGAAATATATTTCACTTCGAGGTCATGAATTCTCGTATTGA 1416 0.524 MPSVAVKLYSVFFKFLLKHRLQNRIQAPPENSDPFGVTSRPEESVAAANPSFTDGVATKDIHIDPFTSLSIRIFLPESALSPPEPHSKHHPPPPKPRSNPIHSKPDPEPGSARLDSISRRNSYGPHYREEPRGNSFGASNSVEGLNLMSGAGAGAGGGGYRGYSPALNNRRRKLPVMLQFHGGGWVSGSNDSVANDTFCRRIVKLCDVIVVAVGYRLAPESRYPAAFEDGLKVLNWLAKQANLAECSKSMGTGRVGGHGGSEFNKSDAHRHIIDSFGASVVEPWLATHGDPSRCVLLGVSCGANIADYVARKAVEGGKLLDPVKVVAQVLMYPFFVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLVPGRSPPLKLMPPTMTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRGHEFSY. 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g03040 471 PANTHER ARYLACETAMIDE DEACETYLASE 40 436 - -
Seca2g03040 471 Pfam alpha/beta hydrolase fold 177 436 IPR013094 GO:0016787
Seca2g03040 471 MobiDBLite consensus disorder prediction 78 138 - -
Seca2g03040 471 MobiDBLite consensus disorder prediction 26 51 - -
Seca2g03040 471 SUPERFAMILY alpha/beta-Hydrolases 40 462 IPR029058 -
Seca2g03040 471 Gene3D alpha/beta hydrolase 151 466 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g03040 Seca-Chr2 90735624 90739607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g03040 1 471 Carbohydrate Esterase AT3G27320 71.429 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g03040 - - gmx:100775445 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g03040 2 90735624 90739607 Seca2g03040 2 90735624 90739607 ECH