Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02992 ATGGAGTTCGACACAGAAGATCATGCATACAGATTTTATAATATGTATGTTGGGTTCATTGGTTTCAACAATAGAAAAGATTGGAGAAATAAAAGTAAATTGGATAAGGATATTGTGATGCCTCAAAAATTTGTTTGTTTTAAGGAAGGCTTCAAAAGGAACAAAGATGAAGAAGGTAAAAAGACTAGCAAAGATATCAGAACTGGATGTTTAGCACACATGGTCATTAGTCGAGAATAA 240 0.325 MEFDTEDHAYRFYNMYVGFIGFNNRKDWRNKSKLDKDIVMPQKFVCFKEGFKRNKDEEGKKTSKDIRTGCLAHMVISRE. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02992 79 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 78 - -
Seca2g02992 79 Pfam FAR1 DNA-binding domain 11 78 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02992 Seca-Chr2 88775711 88775950 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g02992 FAR1 2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02992 - K17604 tpra:123914859 130.183