Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02976 ATGAAGATCGAGGAATTGGAGGATTCAGATTGTAGTAGGGATGAAGAGGGGAAATACGAGAGGCAAATTGTGAGGGTTGATGCAAAGAGAGCGTTGGTCGGAGCAAGTGCTCGAATTCTGTTTTATCCGACGCTTTTGTATAATGTGCTTCGTAACAAGATTGAAGCTGAGTTCCGGTGGTGGGATCAAATTGATGAGTTTTTATTGCTCGGCGCAGTCCCGTTCCCCAAAGATGTTCCTCACTTGAAGAAGCTTGGGGTGGGTGGTGTGATTACTCTGAATGAACCTTATGAAACTTTGGTGTCGTCATCATTATATCATGTAAGTGTTGTCCTTTTTTTCTTTTTAGATTGCTTTCTCTTTGCATTATGTGTGCTACTTATATGTTATGATGAAACTAGAAAGCCTACTTTATGTTAG 420 0.4095 MKIEELEDSDCSRDEEGKYERQIVRVDAKRALVGASARILFYPTLLYNVLRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVSSSLYHVSVVLFFFLDCFLFALCVLLICYDETRKPTLC. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02976 139 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 106 IPR029021 -
Seca2g02976 139 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02976 Seca-Chr2 88552808 88555302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02976 22 106 Protein tyrosine phosphatase (PTP) family AT2G35680 72.941 7.89e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02976 - - gmx:100817410 198.749