Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g02951 ATGTGCAACAAAAACAATCCTCCTCCAATTCCAACTCCAACTCCTTCACAAAACTCTAATATGAAGAAAACCAAGCAACATTTCTCTTCCTCATCTTCCTCTTCCTCTTCTTCTCTTAAACGCAGAAACAGAACCAAAACCAGAAAGCCCAAGTATTTAAGTCTCCGCCTTCAATTATCCCAAAACCAAAACCAACCCAAAAAAACAACCAACCAACAACCACCAAACAAACCCCAACAACAACAACAGCCTCAACTGAATCTCTTCCCCCTCCACCCTGAAAACCTGATGGAGGAAAAGGACATGCACGAAGAGAACAACGTGGCGCTACTCTTCAGTTCCGACGGTGGCGCCACGCTCAACGGCCTCCTCGAAGACGAATCCACCACAACCGCTGCCACGTCAGAGGAAGGATCGATGTCGGCGCTGACGTGTCCTGTGTTGGATGGGAACTGGCTTGTGAGGAAAGCGATGAGGAAGAGTAGCAAAGAGAGGGAAGTTGAAGAGAGGTGGGTTTGTTACTCGGAAGTGGTGGAGGAGAAGAAGGAGCTTATGGAGGAAGTTACGAGTTATTGTTGTGCCACAAGGGAGGATCCGTTGAGGAGAACGACGTCGTTTGGGTCGTTGTCGTTGAAGCTGGATCACGAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCTCTTTATGTAGCAGAGGATGAGGCCCCACAGATTGTTCCTGATTTGTTCAATGCTCACCTTCTTCATAATGCATTTCCTCCCAATCATGTCACATGGGATGGTTGGGGGAGTGATGCTGTTGGGAACACATGGAAAGTTCCTGAAGATTGTGGAGCTAACAAGACGAAGGTGAAAGAAGAAATGGGTTGGAAGTTGGGGCAGAGAGAGGCTAGTGTGCTGAGATACAAGGAGAAGAGGCAAAGCAGGCTCTTTGCTAAGAGGATCCGTTATGAAGTTCGAAAGCTGAATGCTGAGAAGCGACCCAGGATGAAGGGACGATTTGTGAAAAGGGAATGA 1017 0.4769 MCNKNNPPPIPTPTPSQNSNMKKTKQHFSSSSSSSSSSLKRRNRTKTRKPKYLSLRLQLSQNQNQPKKTTNQQPPNKPQQQQQPQLNLFPLHPENLMEEKDMHEENNVALLFSSDGGATLNGLLEDESTTTAATSEEGSMSALTCPVLDGNWLVRKAMRKSSKEREVEERWVCYSEVVEEKKELMEEVTSYCCATREDPLRRTTSFGSLSLKLDHEGILNAWSDKGSLYVAEDEAPQIVPDLFNAHLLHNAFPPNHVTWDGWGSDAVGNTWKVPEDCGANKTKVKEEMGWKLGQREASVLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKRE. 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g02951 338 MobiDBLite consensus disorder prediction 1 85 - -
Seca2g02951 338 MobiDBLite consensus disorder prediction 1 15 - -
Seca2g02951 338 MobiDBLite consensus disorder prediction 16 40 - -
Seca2g02951 338 ProSiteProfiles CCT domain profile. 295 337 IPR010402 GO:0005515
Seca2g02951 338 MobiDBLite consensus disorder prediction 54 85 - -
Seca2g02951 338 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 18 338 - -
Seca2g02951 338 Pfam CCT motif 295 337 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g02951 Seca-Chr2 88287481 88293903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g02951 208 337 C2C2-CO-like Transcription Factor Family AT1G73870 44.615 4.30e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca2g02951 CCT 5e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g02951 - - gmx:100798231 358.992